| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3500 |
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| Symbol | |
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| ID | 5749085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3842482 |
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| End bp | 3843273 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298603 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001564521 |
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| Protein GI | 160898939 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.390268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCGTA TTCCCCTGTC CATCGTTCCC GCCATGCTGG TCGCAGGCGT TCTGACAGCC
TGCTCCAGTA CGCAGCAAGA CCCTACTGCC AAGTGGACCC CGGACCGCAT CTATACCGAG
GCCCGCGACG AAGCCGCCTC CGGCGCGTTC GACAAGGCCG TTCCGCTGTT CGAGAAGCTC
GAAGGCCGTG CCGCCGGCAC GCCCCTGGCC CAGCAGGCCC AGCTCGACAA GGCCTATGCC
CAGTACAAGA GCGGCGACAA GATCCAGGCC ACCGCCACGC TGGACCGCTT CCTGAAGCTG
CATCCGGCCA GCCCCGCCAC CGACTACGCC CTCTACCTGA AGGGCCTGGT CAACTTCAAT
GACAACCTGG GCATGTTCTC CTGGCTGTCG CGCCAGGATC TGTCCGAGCG TGACCAGAAG
GCCGCCAAGG ACTCTTTCGA GTCCTTCCGC GAGCTGGTGA CGCGCTTTCC CGAGTCGCGC
TACGCCGAGG ATTCGCGGCT GCGCATGCAG TACATCGTCA ACTCGCTGGC GCAGTACGAA
GTGCATGTGG CCCGCTACTA CTACGGACGC GGCGCCTACG TGGCCGCCAT CGCGCGCGCG
CAGACGGCCG TCAAGGACTA CCAGGGCGTG CCCGCCGTGC GCGAGGCCAT GCAGATCCTG
GTGAATTCAT ACGACGCCCT GGGCATGACG CAGTTGCGCG ACGACGCGCA ACGCGTGCTG
ACCGCCTCCT ACGGCCAGGA GTCCGACCAG GACCTCACGG CAAAGCAGAA GTCGTGGTGG
AAGCTGTGGT GA
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| Protein sequence | MQRIPLSIVP AMLVAGVLTA CSSTQQDPTA KWTPDRIYTE ARDEAASGAF DKAVPLFEKL
EGRAAGTPLA QQAQLDKAYA QYKSGDKIQA TATLDRFLKL HPASPATDYA LYLKGLVNFN
DNLGMFSWLS RQDLSERDQK AAKDSFESFR ELVTRFPESR YAEDSRLRMQ YIVNSLAQYE
VHVARYYYGR GAYVAAIARA QTAVKDYQGV PAVREAMQIL VNSYDALGMT QLRDDAQRVL
TASYGQESDQ DLTAKQKSWW KLW
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