| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3493 |
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| Symbol | sucA |
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| ID | 5749078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3831741 |
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| End bp | 3834620 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641298596 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001564514 |
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| Protein GI | 160898932 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC AGACGTCGGT CTACCAAGCC TACCAAGGCA ATACCTACCT CTTCGGCGGC
AATGCCCCCT ACGTCGAAGA AATGTACGAG AACTACCTGG CCAACCCCGG TAGCGTGCCG
GATTCCTGGC GCGAGTACTT TGATGCACTG CAACATGTGC CAGCAGTCGA CGGCACGGAC
TCCAAGGACG TCCCGCACCA GCCCGTCATC AACGCTTTCG CCGAGCGCGC CAAGCAAGGC
GGCACCAAGG TGGTCGTGGC CTCCGGCGCC GACTCCGAGC TGGGCCGCAA GCGCACCGCC
GTCCAGCAAC TGATCGCCGC CTACCGCAAC GTCGGCGCAC GCTGGGCCGA TCTCGATCCC
CTCAAGCGCA CCGAGCGCCC CGAAATTCCC GAGCTGGAGC CGTCGTTCTA CGGCTTCACC
GATGCCGACC AGGAAACGGT GTTCAACACG AGCAACACCT TCTTCGGCAA GGAAAGCATG
TCGCTGCGCG AGCTGATGAA CGCTCTGCGC GAGACCTACT GCGGCACGAT CGGCTCCGAG
TACATGTATG CCACCGACCA GACGCAAAAG CGCTGGTGGC AGCAAAAGCT GGAAACCAGC
CGTACCAAGC CCAGCTTTGA CGCCAACCAG AAAAAGCGCA TCCTCGACCG CCTGACGGCT
GCCGAAGGCC TGGAACGCTA CCTGCACACC AAGTACGTCG GCCAAAAGCG CTTCTCTCTG
GAAGGTGGCG AAAGCTTCAT CGTCGCCATG GACGAGCTGA TCAACGCTGC CGGCCAGAAG
GGCGTGCAGG AAGTCGTGAT CGGCATGGCC CACCGCGGCC GCCTGAACGT GCTGGTCAAC
ACCCTGGGCA AGATGCCCAA GGACCTGTTC GCCGAGTTCG ACCACACTGC CCCCGAAGAC
CTGCCCGCAG GTGACGTGAA GTACCACCAG GGCTTCAGTT CCGACGTGTC CACCGCAGGC
GGCCCCGTCC ACCTGTCGCT GGCCTTCAAC CCCTCGCACC TGGAAATCGT CAACCCCGTG
GTCGAAGGCT CGGTGCGTTC GCGCATGGAC CGCCGCGACG ACCCGCATGG CAAGCAGGTG
CTGCCCGTGC TGGTGCACGG CGATGCCGCC TTTGCCGGCC AGGGCGTGAA CCAGGAAACC
CTGGCGCTGG CCCAGACCCG TGGCTACACC ACGGGCGGCA CGGTGCACAT CATCATCAAC
AACCAGATCG GCTTCACCAC CTCCGATCCG CGCGACACCC GCTCCACCCT GTACTGCACC
GACATCGTCA AGATGATCGA GTCGCCCGTG CTGCACGTGA ACGGTGACGA TCCGGAAGCC
GTGGCCCTGG CCGTGCAACT GGCCTTGGAA TTCCGCATGG AGTTTGCCAA GGACGTGGTC
GTGGACATCG TCTGCTTCCG CAAGCTGGGC CACAATGAGC AGGACACGCC TGCCCTGACC
CAGCCGCTGA TGTACAAGAA GATCGGCGCC CACCCCGGCA CCCGCAAGCT GTACGCCGAC
AAGCTGGCCA CGCAAGGCCT GGGCGAGACG CTGGGCGACG ACATGGCCAA GGCCTACCGT
GCCGCCATGG ACGAAGGCCG CCACACCGTG GACCCGGTGC TGACGAACTT CAAGAGCAAG
TACGCCGTGG ACTGGAGCCC GTTCCTGGGC AAGACCTGGA CCGACGCCGG CGACACCGCC
ATCCCGCTGA CCGAATGGAA GCGTCTGGCC GAACGCATCA CCACCATCCC CGAGACCGTG
ACCCCGCACG CGCTGGTCAA AAAGGTCTAT GACGACCGCG CAGCCATGGG CCGCGGCGAT
GTCAACGTGG ACTGGGGCAT GGGCGAGCAC ATGGCCTTCG CATCGCTGGT CGCATCGGGC
TACCCCGTGC GCCTGTCGGG CGAGGACTGC GGCCGCGGCA CCTTCACCCA CCGCCACTCG
GTCATCCATG ACCAAAAGCG TGAAAAGTGG AGCGAAGGCA CCTACATCCC GCTGCAGAAC
GTGGCCGACA GCCAGGCTCC GTTCACCGTC ATCGACTCCA TCCTGTCCGA AGAGGCCGTG
CTGGGCTTCG AGTACGGCTA CGCGTCGAAC GATCCCAACA CCCTGGTGAT CTGGGAAGCC
CAGTTCGGCG ACTTCGCCAA CGGCGCCCAG GTGGTGATCG ACCAGTTCAT CGCCTCCGGT
GAGGTCAAGT GGGGCCGCAT CAACGGCCTG ACGCTGATGC TGCCGCACGG CTATGAAGGC
CAGGGCCCCG AGCACAGCTC GGCACGCCTG GAGCGCTTCA TGCAGCTGGC CGCCGACGCC
AACATGCAGA TCGTGCAGCC CACCACGGCC AGCCAGATCT TCCACGTGCT GCGTCGCCAG
ATGGTGCGCC CGCTGCGCAA GCCGCTGGTC ATCATGACCC CCAAGTCTCT GCTGCGTAAC
AAGGATGCGA CCTCGCCGCT GTCCGAGTTC ACCAGCGGTG GTTTCCAGAC CGTGATCCCC
GAGCAGGACG AAGCCGTCGT GAAGAACGCG GCCAAGGTCA AGCGCGTGAT CGCTTGCTCG
GGCAAGGTCT ACTACGACCT GGTCAAGAAG CGCGCCGAGA AGGAAAGCAA GGACGTCGCC
ATCATCCGCG TCGAACAGCT GTACCCCTTC CCGCACAAGG CCTTCGCCGC TGAACTCAAG
AAGTTCGGCA ACGCCACCGA GATCGTCTGG TGCCAGGACG AGCCGCAGAA CCAGGGCGCC
TGGTTCTTCG TGCAGCACTA CATCCACGAG AACATGCTCG ATGGCCAGAA GCTGGGCTAC
TCCGGCCGCG CTGCCTCGGC ATCGCCCGCC GTGGGTTACG CACACCTGCA CCAGGAGCAG
CAAAAGGCCC TGGTGGAAGG CGCGTTCTCC AAGCTCAAGG GTTTTGTCCT GAACAAGTAA
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| Protein sequence | MSDQTSVYQA YQGNTYLFGG NAPYVEEMYE NYLANPGSVP DSWREYFDAL QHVPAVDGTD
SKDVPHQPVI NAFAERAKQG GTKVVVASGA DSELGRKRTA VQQLIAAYRN VGARWADLDP
LKRTERPEIP ELEPSFYGFT DADQETVFNT SNTFFGKESM SLRELMNALR ETYCGTIGSE
YMYATDQTQK RWWQQKLETS RTKPSFDANQ KKRILDRLTA AEGLERYLHT KYVGQKRFSL
EGGESFIVAM DELINAAGQK GVQEVVIGMA HRGRLNVLVN TLGKMPKDLF AEFDHTAPED
LPAGDVKYHQ GFSSDVSTAG GPVHLSLAFN PSHLEIVNPV VEGSVRSRMD RRDDPHGKQV
LPVLVHGDAA FAGQGVNQET LALAQTRGYT TGGTVHIIIN NQIGFTTSDP RDTRSTLYCT
DIVKMIESPV LHVNGDDPEA VALAVQLALE FRMEFAKDVV VDIVCFRKLG HNEQDTPALT
QPLMYKKIGA HPGTRKLYAD KLATQGLGET LGDDMAKAYR AAMDEGRHTV DPVLTNFKSK
YAVDWSPFLG KTWTDAGDTA IPLTEWKRLA ERITTIPETV TPHALVKKVY DDRAAMGRGD
VNVDWGMGEH MAFASLVASG YPVRLSGEDC GRGTFTHRHS VIHDQKREKW SEGTYIPLQN
VADSQAPFTV IDSILSEEAV LGFEYGYASN DPNTLVIWEA QFGDFANGAQ VVIDQFIASG
EVKWGRINGL TLMLPHGYEG QGPEHSSARL ERFMQLAADA NMQIVQPTTA SQIFHVLRRQ
MVRPLRKPLV IMTPKSLLRN KDATSPLSEF TSGGFQTVIP EQDEAVVKNA AKVKRVIACS
GKVYYDLVKK RAEKESKDVA IIRVEQLYPF PHKAFAAELK KFGNATEIVW CQDEPQNQGA
WFFVQHYIHE NMLDGQKLGY SGRAASASPA VGYAHLHQEQ QKALVEGAFS KLKGFVLNK
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