Gene Daci_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3428 
Symbol 
ID5749014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3758740 
End bp3759309 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content51% 
IMG OID641298533 
Producthypothetical protein 
Protein accessionYP_001564451 
Protein GI160898869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000225988 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.043654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAT ACGCAGTTCT AATTACCGTC TTGACATCGG CACTTTTTAG CGCCCATGCA 
CAACAGGTCT ACAAATGCGG CAACACCTAC AGCCAGACGC CATGCGCCCC AGATGCAAAG
GCTGTCGACA TCAGAGCTTC TGATGGTTGT GAGAGTGCCC AGAACAGATA CCGGAGCGAC
TGCTTCGATA AGCGCTGGGC AGAATCTGAT AAAGAGTCGG CTAAATTGAG TAAGGAAATA
GCGCTTGGTA AACTCCGTGT TCAAAAATTG ATTGATGAAA ACGGACCAAT CACGCCTCCT
AGCGATGCAA CACTGGCGCG TAACTATGAG GCCTGCCAAG CGGCAATCCG GACAAAGTTG
AAAGACCCTG ACTCAGCAAA ATTTGATGCG TTCACGCGGT CTGCCAAGGC GGCTCCTGCA
CTTGACTATC CAACCTGGCA CGCAGCGATA GTGTATTCCG GACTCGTTAA CGCCAAGAAT
AGTTACGGGG GGTATACAGG ATCGAAATTC GCATGGTGCG CGTTCGATCT TGCCGAGCAA
CGCATTTTGT TTACCCGTGG CCCTGATTAA
 
Protein sequence
MREYAVLITV LTSALFSAHA QQVYKCGNTY SQTPCAPDAK AVDIRASDGC ESAQNRYRSD 
CFDKRWAESD KESAKLSKEI ALGKLRVQKL IDENGPITPP SDATLARNYE ACQAAIRTKL
KDPDSAKFDA FTRSAKAAPA LDYPTWHAAI VYSGLVNAKN SYGGYTGSKF AWCAFDLAEQ
RILFTRGPD