| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3368 |
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| Symbol | |
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| ID | 5748953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3698036 |
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| End bp | 3701233 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298472 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001564391 |
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| Protein GI | 160898809 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGT TCTTCATCAA CCGGCCCATC TTCGCGTGGG TCATCGCCAT CGTCATCATG
CTGGGCGGCG CGCTGTCCAT CTTCACGCTG CCGCTGGAGC AATACCCCGA CATCGCGCCG
CCGCGCGTGA CCATCGGCGC GCAGTACACG GGCGCCTCGG CCGAGACGGT CGAGAACTCG
GTGACCCAGA TCATCGAGCA GCAGCTCAAG GGCATCGACA ACATGCTCTA CATGAGCTCC
ACGTCCGACG CCTCGGGCCG TGCGCGCACC ACGCTGACCT TTGCGCCGGG CACCAACATC
GACGTGGCCC AGGTGCAGGT GCAAAACAAG CTGCAGTCCG CCGTGAACCG CCTGCCCGAC
GCCGTCAAGA GCCGGGGCGT GTTCGTGAAC AAGGGCGGCC AGGACTTCCT GGTCACCTAC
AGCTTCTTCT CCAAGGACCC GGCCATGACC GCGGTCGATA TCGGCGACTA CCTGACCAGC
AACCTGGTCG ATGTGATCGG CCGCCTCGAC GGCGTGGGCG ATGTCAACGT CTTCGGCACC
AACTATGCGA TGCGCATCTG GATGGACCCG GCCAAGATGG AGAAGTACGC GCTGATGCCG
TCGGACCTGG TCAATGCGCT GAACTCGCAG AACGCCCAGG TCTCGGCCGG CCAGCTGGGC
GCGCTGCCCG CCGTCTCCGA CCAGCAGCTG AACGCCACCA TCACGGCGCG CACCAAGCTC
AAGACGGTGG AGCAGTTCGA AGATATCGTG CTCAAGTCCT CGCTGGACGG CTCGGTGGTG
CTCATGAAGG ACGTGGCCCG CGTGGAGCTG GGCGCCGACA ACCTGACCAT CAAGGCCAAG
CTCAACGGAC TGCCCGGCGC GGGCATGGGC ATCGTGCTGG CCGATGGCGC CAATGCCATG
CAGGTGGCCG ACACCATCGC CGCCAAGCTG GCCGAGCTCA AGCCGTTCTT CCCCAACGAG
ATCGACTACT TCGTCAGCTC GGACTCCACG CCCTTCGTGC GCGCCTCCAT CAAGGAAGTG
GTCAGCGCGC TGGGCGAGGC CATGATCCTC GTGGTCATCG TGATGTTCAT CTTCCTGCAG
AACTTCCGCG CCACGATGAT CCCCGCCATC GCCGTGCCCG TGGTGCTGCT GGGCACCTTC
GGCGTGCTGT CGCTGGCCGG GTACTCGATC AATACGCTGA CCATGTTCGC CATGGTGCTG
GCCATCGGCC TGCTGGTGGA CGATGCCATC GTCGTGGTGG AGAACGTCGA GCGCGTGATG
CACGAGACGG GCATGTCGCC CAAGCAGGCC ACGCGCCAGT CCATGCGCGA GATCACGCCG
GCCCTGGTGG GCATCGGCGT GACGCTGTCG GCCGTGTTCG TGCCCATGGC GTTCTTCGGC
GGCTCCACGG GCGTGATCTA CCGGCAGTTC TCCATCACCA TCGTCGCGGC CATGGCGCTG
TCGGTGTTCG TGGCGCTGAC GCTGACGCCT GCGCTGTGCG CCACGCTGCT CAAGCCGCCC
GCAGCGGGCG GGGCAGGGCA TGACCGCCCC ATCCGCAGCG GCATCCTGGG GGTGAATGAC
CGGTTCTTCC GCTGGTTCAA CCACCATTTC GACGCCACGG CCGCGCGCTA CCAGGGCACG
GTGGCCTACT CGCTGCGCCG CGCCAAGCGC ATGATGCTGA TCTTCCTGGC CGTCTGCGGC
GTGGTCTGGC TGCTGATGGC GCGCCTGCCC ACTTCCTTCC TGCCGGACGA GGACCAGGGC
TTCGTCTTCG TCAACATCAA CCTGCCTTCG GGCGCGGCCG ATACGCGGCT GCAGGGCGTG
CTCGACGAGG TGCGCGACTA CTTTGCCAAG CAGCCCGACG TGGTGAGCTT CTACCAGGTC
TCGGGCCTGA ACGGCGACCA GGCCTCGGCA CGCGCCTTCG TGCGGCTGAA GACCTGGGAG
GAGCGTCCGC TGCCCGGCCA GTCGGCCTCC GAGATCGCGC ACCGCGCGAC CAAAGACCTG
TCCTCCATCC GCGATGCGCG CGTGCTGGTC GTGCTGCCGC CGGCCGTGCG CGGCCTGGGC
TCCAGCTCGG GCTTCAACTT CATGATCAAG GACATGAACG GCCTGGGCCA CCAGGTGCTG
CTGGAGGCCA AGGAGAAATT CCTGACCGAG GCCCGCAAGC GCCCCGAGCT CACCAATCTG
CGCATGACCA ACCTGGAAGA CGCCAGCGAG CTGCGCCTGG ACATCGACGA CCGCAAGGCC
GCCGCACTGG GCCTGTCGTA CACCGACATC AACAGCGTGC TGTCCAGCGC CATGGGCGGC
ACCTATGTCA ACGACTTCCT GAACAACGAG CGCGTCAAGC GCGTCTACAT CCAGGGCGAT
GCGCCGCACC GCATGCTGCC CCAGGACATC GCCAAATGGA CGGTGCGCAA CGCCAAGGGC
GAGATGGTGC CGTTCAGTTC GTTCTCCAGC AGCTACTGGG CCTACGGCTC GCCACAGCTC
ATGCGCTACA ACGGCAACCC GGCCTACGAA ATGGAAGGCC GCGCCGCCTC CGGCGTCAGC
TCGGGCACGG CCATGCAGAT CGTGGAGGAC ATCCTGCGCA CCCTGCCGGC CGGCATAGGC
TACGAGTGGA CCGGCGCCTC GCTGCAGGAG CGCCAGTCCG GCGCCCAGGC GCCGCTGCTG
TACGCCATCT CCATCCTCTT CGTGTTCCTG TGCCTGGCGG CGCTGTACGA AAGCTGGACC
GTGCCGCTGT CGGTGATGCT GGCCGTGCCG CTGGGCGTGG TGGGCGCGCT GGCCGCCACC
TACACGCGCG GGCTGACGAA CGACGTGTAC TTCCAGGTGG GCCTGCTGAC CACGGTGGGC
CTGGCGTCCA AGAACGCCAT CCTGATCGTG GAATTTGCGG TGCAGCTGCA GGAGCAGGGC
AAGAGCATCT TCGACGCCGT GGTCTCGGCC GTGCGCCTGC GCCTGCGTCC CATCTTGATG
ACCTCGCTGG CCTTCGGCTT CGGCGTCATT CCGCTGGCCA TCGGCACGGG GGCCGGCGCG
GGCGGGCGCA ATGCCATCGG CACGGCCGTG CTCGGCGGCA TGCTGGCCTC CACGGTGCTG
GGCATCTTCC TGGTGCCGGT GTTCTTCCTG CTGATCCGCA GCTGGTTCAA GAGCCACTCG
CGCACCGAGG ACGACGCGCC CCAGCCCACT GCCGGATCAC CTGATTCACC GCATACCGCA
AAGGAGAGCG CAGCATGA
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| Protein sequence | MAQFFINRPI FAWVIAIVIM LGGALSIFTL PLEQYPDIAP PRVTIGAQYT GASAETVENS
VTQIIEQQLK GIDNMLYMSS TSDASGRART TLTFAPGTNI DVAQVQVQNK LQSAVNRLPD
AVKSRGVFVN KGGQDFLVTY SFFSKDPAMT AVDIGDYLTS NLVDVIGRLD GVGDVNVFGT
NYAMRIWMDP AKMEKYALMP SDLVNALNSQ NAQVSAGQLG ALPAVSDQQL NATITARTKL
KTVEQFEDIV LKSSLDGSVV LMKDVARVEL GADNLTIKAK LNGLPGAGMG IVLADGANAM
QVADTIAAKL AELKPFFPNE IDYFVSSDST PFVRASIKEV VSALGEAMIL VVIVMFIFLQ
NFRATMIPAI AVPVVLLGTF GVLSLAGYSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
HETGMSPKQA TRQSMREITP ALVGIGVTLS AVFVPMAFFG GSTGVIYRQF SITIVAAMAL
SVFVALTLTP ALCATLLKPP AAGGAGHDRP IRSGILGVND RFFRWFNHHF DATAARYQGT
VAYSLRRAKR MMLIFLAVCG VVWLLMARLP TSFLPDEDQG FVFVNINLPS GAADTRLQGV
LDEVRDYFAK QPDVVSFYQV SGLNGDQASA RAFVRLKTWE ERPLPGQSAS EIAHRATKDL
SSIRDARVLV VLPPAVRGLG SSSGFNFMIK DMNGLGHQVL LEAKEKFLTE ARKRPELTNL
RMTNLEDASE LRLDIDDRKA AALGLSYTDI NSVLSSAMGG TYVNDFLNNE RVKRVYIQGD
APHRMLPQDI AKWTVRNAKG EMVPFSSFSS SYWAYGSPQL MRYNGNPAYE MEGRAASGVS
SGTAMQIVED ILRTLPAGIG YEWTGASLQE RQSGAQAPLL YAISILFVFL CLAALYESWT
VPLSVMLAVP LGVVGALAAT YTRGLTNDVY FQVGLLTTVG LASKNAILIV EFAVQLQEQG
KSIFDAVVSA VRLRLRPILM TSLAFGFGVI PLAIGTGAGA GGRNAIGTAV LGGMLASTVL
GIFLVPVFFL LIRSWFKSHS RTEDDAPQPT AGSPDSPHTA KESAA
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