| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3327 |
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| Symbol | |
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| ID | 5748912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3649462 |
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| End bp | 3651876 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298431 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001564350 |
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| Protein GI | 160898768 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.218834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC CCAAGTCCTC CCGATTCCGA TTCCGCCTCC GTCTCCGCCG CACAGCGGTT
TTTCATGCAT GTGCAGGCCT GGTGCTGGGC CTGCAACTGC AGTTGGCCGC CGCGCAATCG
GTGTCCTTCG ACGTGCCGGC CCAGCCGCTG GCCCAGGCGC TGAGCCAGTT TGCGCGCCAG
GCGGGGCTGC AGCTCACCTA CTCCTCCGAA CTGGTGCAGG GCCGGCAGGC CCCGGCGCTC
AACGGCAGCC ACGATGTGCG CCAGGGCCTG GCGGCATTGC TTCAGGGCAG CGGCCTGCAG
GGGCGCATCG AGGGCGGTAC GCTGACCCTG CTTCCCACTG CCGCCAACGC GCCTGAGAAC
GCGCACCGCC TGTCCGAGAT CACCGTCACG GCCGGCGACC AGTATGTGAG CCTGCTGCCC
GCGCCCTACG CCGGCGGGCA GGTGGCCAAG GGCGTGCGCC TGGGCGTGCT GGGCAATACC
GGCAACATGC AGGCGCCGTT CAGCACCACC AGCTACACGT CCGAGGCCGT GCGCAACCAG
CAGGCCGGCA CCATTGCCGA GGCGGTGAAC CGCGACCCTT CCGTGCGCTA CACCGTGCTG
CCGGGCGGCA ACGTGGACAA CCTCTATATC CGGGGCTTTC CGATCTGGGA GGGCAACTCG
GGCGAGATCG CCTTTGACGG CATCTACGGC ATTGCTCCCA ACTACCGCGT GCGCACCGAG
TACGTGGACC GCATCGAGGT GGTCAAGGGG CCCGGCGCGC TGCTGTTCGG CATGTCGCCC
AATGGCTCGG TGGGCGGGGT GATCAACATC GCGCCCAAGC GTGCCAATGA AGACGTGGCG
CGGCTGACCA CGGGCTGGAC TTCGGACAGC CTCTGGCGTG CCCATGCCGA CGTGGGCCGG
CGCTTCGGCG ACGAGGCCCA GTACGGCATC CGTGTGAACG CCAGCAAGTA CGGCGGCGAT
ACGTCCATGG ACCATCAAAG CACCGACGGC CATGTGCTGG CCGTGGCGCT GGACTACGAG
GTGGAGCGCT TCCGTGCCAC GCTGGACCTG CTCTCGCAGG ACGAGCGCAT CGACGGCGTG
GGCCGGCCCA TCATGCCTAC GGGACTCACC TCCATGCCTG CTGCGCCCGA TGGCCGGCGC
AACGTGACCC AGCCCTGGGA ATGGTCCAAG AACCGCGAGC GCGCCGTGCT GCTGCGCACC
GAACTGGACC TCACGCAGCA GCTCACGCTG TTCGCCAACA TCGGCCAGTC GCGCGCCGAT
GTGGACCGCA TCTACGACTC GGCCCCGCGC CTGACCAGTG CGGCGGGCGC CACCAGCATC
ACGCCCACCT ACGCGGTGTT CGACGTGGAC CGCAGCACCA TCGACGCGGG CCTGCGCTCG
CGCTTTGCGC TGGCCGGTGT CAAGCATTCG GTCACGCTGC AGCTGGCCAG CTACCGCGAG
GATTTTCACC GCGCGCTGCA GGCGGGCTCC ACCGTGGTGT CCAACATCTA TGCGCCCATT
GCCCACGCGC CGCAGAGCAT TGCGCGGCCT TCGGTCATTC CGCGCATCCA TGACAACCGC
AACACCAGCC TGGCGCTGGT GGACACGCTC TCGCTGCTGC AGGACCGGCT GCAACTGTCG
CTGGGCCTGC GCCACCAGGC CATCAAGTCC ACCAACTACA ACGTGCTCAC GGGCGGCACC
GCCAATGTCT ACGACGAGAG CGTGACCACG CCCGCCGTGG GGGTGGTCTG GCGCCAGGCG
CCCAACTGGA GCCTCTACGC CAACTACATC GAAGGCCTGA GCAAGGGCGA CATCGCGCCG
CCCGCGGCCA GCAACTACGG CGAGGTGCTG CGTCCCTACA AGAGCCGCCA GTACGAAGTG
GGCAGCAAGT ACGACTTCGG CAGCTTCATG GCCACGGCCG CCCTGTTCAG CATTGAAAAA
CCCAGCGGCG GCCTGGACCA GGGCGTCTAC AAGACCAATG GCGAGCAGCG CAACCTGGGC
ATGGAGCTGT ATGCCTACGG CGAGGCCGCG CGCGGCCTGC GCCTGCTCGG TGGCGTGACC
TGGCTCAAGC CCGAGATCAC GCGCTCGGCC ACGCCTGCGC TGGTGGGCAA CCGGCCCATC
GGCACCTCGC GCCTGCTGGC CAACCTGGGC GTGGAATGGG ATGTGCCCGC CCTTGAGGGC
CTGACCCTGG TCGGCGACCT GGCATACACC GGCGCCCAGT TCGTGGACCA GGCCAACCGC
CTGCGCATCC CGGGCTGGAC ACGCACCGAC CTGGGCCTGC GTTATGCCAC CCGCATCGCG
GGCCGCAAGA CCACGCTGCG CGCCACGGTG CAGAACGTGG CCGACCGCAA GGCCTGGGCC
GGTGTCACGT CCTGGGGCGC CGTCTCGCCG ATGATTCCGC GCACCTTCGT GGTATCGGCT
TCGGTGGATT TCTGA
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| Protein sequence | MSAPKSSRFR FRLRLRRTAV FHACAGLVLG LQLQLAAAQS VSFDVPAQPL AQALSQFARQ
AGLQLTYSSE LVQGRQAPAL NGSHDVRQGL AALLQGSGLQ GRIEGGTLTL LPTAANAPEN
AHRLSEITVT AGDQYVSLLP APYAGGQVAK GVRLGVLGNT GNMQAPFSTT SYTSEAVRNQ
QAGTIAEAVN RDPSVRYTVL PGGNVDNLYI RGFPIWEGNS GEIAFDGIYG IAPNYRVRTE
YVDRIEVVKG PGALLFGMSP NGSVGGVINI APKRANEDVA RLTTGWTSDS LWRAHADVGR
RFGDEAQYGI RVNASKYGGD TSMDHQSTDG HVLAVALDYE VERFRATLDL LSQDERIDGV
GRPIMPTGLT SMPAAPDGRR NVTQPWEWSK NRERAVLLRT ELDLTQQLTL FANIGQSRAD
VDRIYDSAPR LTSAAGATSI TPTYAVFDVD RSTIDAGLRS RFALAGVKHS VTLQLASYRE
DFHRALQAGS TVVSNIYAPI AHAPQSIARP SVIPRIHDNR NTSLALVDTL SLLQDRLQLS
LGLRHQAIKS TNYNVLTGGT ANVYDESVTT PAVGVVWRQA PNWSLYANYI EGLSKGDIAP
PAASNYGEVL RPYKSRQYEV GSKYDFGSFM ATAALFSIEK PSGGLDQGVY KTNGEQRNLG
MELYAYGEAA RGLRLLGGVT WLKPEITRSA TPALVGNRPI GTSRLLANLG VEWDVPALEG
LTLVGDLAYT GAQFVDQANR LRIPGWTRTD LGLRYATRIA GRKTTLRATV QNVADRKAWA
GVTSWGAVSP MIPRTFVVSA SVDF
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