Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3306 |
Symbol | |
ID | 5748891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3624999 |
End bp | 3626636 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298410 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001564329 |
Protein GI | 160898747 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0145757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGTC TGATGCAAAG CCAACCACTG TTGATCTCGT CGCTGATCGA CTTCGCCGAC CGCCACCATG GCGATGCGGA GATCGTCTCG CGCAGGGTGG AGGGCGATAT CCATCGCTAT ACGTACCGCG ACCTGGCACG GCGCTCGCGC CAGCTGGCGA ACACGCTGGA CGGCCTGGGC TTGCAGCCCG GCGACCGCGT GGCCTCGCTG GCCTGGAACG GCTACCGCCA CATGGAGATG TACTTCGGCG TCAGCGGCTC GGGCCGCGTG CTGCACACGG TCAACCCGCG CCTGCACCCC GACCAGGTGG CGTGGATCAT CAACCACGCG GAAGACCGCG TCATGTGCTT TGACCTGACC TTCCTTCCCA TCATCCAGGC CGTGCATGCC AAGTGCCCCA CGGTGCGCCA GTGGGTGGCG CTGTGCGATG CGGATCGCCT GCCCGCCGAC AGCGGCATTC CGGGCCTGGT CAGCTACGAG GCCTGGATTG CCGGCCAGCC CGACCAGTAC CAGTGGCCCG AATTCGACGA GAACACGGCC TCCAGCATGT GCTACACCAG CGGCACCACG GGCAACCCGA AGGCCGTGCT GTACAGCCAC CGTTCCACCA CGCTGCACGC CTACGCGGCC GCGCTGCCCG ATGTGATGTG CATATCGGCG CGCGACTCGG TGCTGCCTGT CGTGCCCATG TTCCACGTCA ACGCCTGGGG CATTCCCTAC TCGGCCGCGC TCACGGGCTG CAAGCTGGTG TTCCCGGGCC CGGCGCTGGA CGGCAAGTCG CTGTACGAGC TGATCGAGGC CGAGGGCGTC ACCTACGCGG CTGGCGTGCC CACGGTCTGG CAGATGCTGC TGGGCCACAT CAGGCCGGGC GGCCTGCGGT TTTCCACGCT CAAGCGCACG GTGATCGGCG GCTCCGCCTG CCCGCCGGCC ATGATCACGG CCTTCCAGGA CGAGTTCGGC GTGGAGGTGC TGCATGCCTG GGGAATGACC GAGATGAGCC CGCTGGGCAC GCTGTGCACG CTCAAGAACA AGCAGCTGCA GCTGCCCAAG GACGAGCAGA TGAAGATCCT GCAAAAGCAG GGCCGCGCCA TCTACGGCGT GGATATGCGC ATCGTCGACA GCGACGGCAC CGACCAGCCC TGGGACGGCA AGAGCTATGG CGACCTGCTG GTGCGCGGCC CCTGGATCGT GGACAGCTAC TTCAAGGGCG AGAGCCCGCT GGTCAAGGAC GCGCAGGGCC GCGGCTGGTT CCCCACGGGC GACGTGGCCA CCATCGACCC GGACGGCTTC ATGCAGATCA CCGACCGCAG CAAGGACGTG ATCAAGTCCG GCGGCGAGTG GATCAGCTCC ATCGACATCG AGAACATCGC CATGGCCCAT CCGGCCGTGG CCATGGCCGC CTGCATCGGC ATGCCGCATC CCAAGTGGGA CGAGCGCCCC ATCGTCGCCG TGGCGAAGAA GCCCGGCGCC GAGGTCACGC GCGAGGAACT GCTCAAGTTC TACGAGGGCA AGACCGCCAA GTGGCAGATC CCCGACGACG TGGTCTTCGT CGATGCCATC CCGCTGGGCG CCACCGGAAA AATGCTCAAG ACCCGGCTGC GCGAGCAGCT GGCCGGCTAC CGGCTGCCGG GGCTTTGA
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Protein sequence | MLGLMQSQPL LISSLIDFAD RHHGDAEIVS RRVEGDIHRY TYRDLARRSR QLANTLDGLG LQPGDRVASL AWNGYRHMEM YFGVSGSGRV LHTVNPRLHP DQVAWIINHA EDRVMCFDLT FLPIIQAVHA KCPTVRQWVA LCDADRLPAD SGIPGLVSYE AWIAGQPDQY QWPEFDENTA SSMCYTSGTT GNPKAVLYSH RSTTLHAYAA ALPDVMCISA RDSVLPVVPM FHVNAWGIPY SAALTGCKLV FPGPALDGKS LYELIEAEGV TYAAGVPTVW QMLLGHIRPG GLRFSTLKRT VIGGSACPPA MITAFQDEFG VEVLHAWGMT EMSPLGTLCT LKNKQLQLPK DEQMKILQKQ GRAIYGVDMR IVDSDGTDQP WDGKSYGDLL VRGPWIVDSY FKGESPLVKD AQGRGWFPTG DVATIDPDGF MQITDRSKDV IKSGGEWISS IDIENIAMAH PAVAMAACIG MPHPKWDERP IVAVAKKPGA EVTREELLKF YEGKTAKWQI PDDVVFVDAI PLGATGKMLK TRLREQLAGY RLPGL
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