Gene Daci_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3302 
Symbol 
ID5748887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3618452 
End bp3619984 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content68% 
IMG OID641298406 
Producthypothetical protein 
Protein accessionYP_001564325 
Protein GI160898743 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.232274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC ATGCTGCCGC CGAAGGCCAG GCTCCGGCGA CCTCCCCACG CCCTCCCATC 
TCCTGGCAAG ACGGCTTCGC CGCCCTGGGC CCGGACTTCT TCACCCATCT GCGCCCCACG
CCGCTGCCCG AACCGCACTG GATTGCCACC AGCACCGGCA CAGCCGAGCT GCTGGGCCTG
GACCCGCAGT GGCTGGCCTC CGATGAGGCC CTGCAGGCGC TCACCGGCAA TGCCGTGCTG
CCCGGCAGCC ATCCGCTGGC CAGCGTCTAC AGCGGCCACC AGTTCGGCGT CTGGGCCGGC
CAGCTTGGCG ACGGCCGTGC CATCTTGCTG GGCGAAACGG CCTCGGGCCA CGAGATTCAG
CTCAAGGGCG CGGGCCGCAC GCCCTACTCG CGCATGGGCG ACGGGCGCGC CGTGCTGCGC
TCTTCCATCC GCGAGTTCCT GTGCAGCGAG GCCATGCACG CCCTGGGCAT TCCCACCACG
CGCGCGCTGA GCCTCACCGG ATCGCCCGCC CCCATTCGCC GCGAAGAGAT CGAGACCGCC
GCCGTGGTGG CACGCGTGGC GCCCAGCTTC ATACGCTTCG GCCACTTCGA GCACTTTGCG
GCGCGCGACC AGATAGCGCC TTTGCGCCAA CTGGCCGACT ACGTGATCGA CCACTACTAC
CCCGAATGCC GCACGGCCGA GGCACTGGCC GGCAACGCCT ACGCCAACTT CCTGCAGGCC
GTGAGCGAGC GCACGGCGCG GCTGCTGGCG CACTGGCAGG CCGTGGGCTT TTGCCATGGC
GTGATGAACA CCGACAACAT GAGCATCCTG GGACTGACCA TCGACTACGG TCCCTTCCAG
TTCCTTGATG CCTTCAACCC CGGCCACATC TGCAACCACA GTGACACCCA GGGCCGCTAC
GCCTTCAACC GCCAGCCCCA GGTGGCCTAC TGGAACCTGT ACTGCCTGGG CCAGGCCCTG
CTGCCGCTGA TCGGCGAAGA GGAACTGACT ATTGCAGCGC TGGAGTCGTA CAAGCAGGTG
TTTCCGCAGG CCTATGGCGC CCTCATGCTG CGCAAGCTGG GCCTGCCCGA AGATGCGCCA
GGCACGCCGC CCGCTGAGGG GCGCTTTGCC GCCCTGGTGA ACCCGCTGCT GCAGCTCATG
GCCGACAACG CGGTGGACTA CACCATCTTC TTCAGCCGCC TGACCGATGC GGTGGCTGCA
GGTGCCGGTG CCGGCACGGA CCTCGAGCCC GTGCGCGACC TGGTGCTTGA CCGCGAGGCC
TTCGACCGCT GGGCAGCCCT GTACGCGCGG CACCTGGCAG GCACGGATGC CGCGGCGGCC
GCCGCTTTGA TGCAAGAATC GAATCCGCGC TTCGTGCTGC GCAACCACCT GGGCGAGATG
GCCATCCGCG CCGCAAAGGC CGGTGACTTC GCTCCCGTGC GCCAATTGCT GGCCGTGCTG
CAGACTCCGT TCGCCCCCCA CGCCGAGCAT GCCGAATGGG CAGGCTTCCC GCCCGATTGG
GCTTCCTCCA TCGAGATCAG CTGTTCATCA TGA
 
Protein sequence
MNLHAAAEGQ APATSPRPPI SWQDGFAALG PDFFTHLRPT PLPEPHWIAT STGTAELLGL 
DPQWLASDEA LQALTGNAVL PGSHPLASVY SGHQFGVWAG QLGDGRAILL GETASGHEIQ
LKGAGRTPYS RMGDGRAVLR SSIREFLCSE AMHALGIPTT RALSLTGSPA PIRREEIETA
AVVARVAPSF IRFGHFEHFA ARDQIAPLRQ LADYVIDHYY PECRTAEALA GNAYANFLQA
VSERTARLLA HWQAVGFCHG VMNTDNMSIL GLTIDYGPFQ FLDAFNPGHI CNHSDTQGRY
AFNRQPQVAY WNLYCLGQAL LPLIGEEELT IAALESYKQV FPQAYGALML RKLGLPEDAP
GTPPAEGRFA ALVNPLLQLM ADNAVDYTIF FSRLTDAVAA GAGAGTDLEP VRDLVLDREA
FDRWAALYAR HLAGTDAAAA AALMQESNPR FVLRNHLGEM AIRAAKAGDF APVRQLLAVL
QTPFAPHAEH AEWAGFPPDW ASSIEISCSS