| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3297 |
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| Symbol | |
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| ID | 5748882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3613791 |
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| End bp | 3615992 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298401 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001564320 |
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| Protein GI | 160898738 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.14113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTT CAGATTGCCG TTCCCGACCT TTCGTCTCCG GCCCCCAGTC ATGCCTTTAT
TCGGTCTTCG CTGCGGCGCT GGTCACACCC GCATACGCGC AGGATGTGTC CTCTGAGGAT
CGCCAGGTCC AGCTGGCGCC GGTCACCGTT TCGGGGCCGC GCACCACCGG CTCGCGCACC
GAGGCATCCG ACTCGGTCAA GTACGCCAAG CCGCTGCTGG ACGTGCCCCA GACCATTACG
GTGGTACCGG GGCAGGTGCT CCAGGAACAG AACGCCCTGA GCCTGCAGCA GGCGCTGTCC
AATGTGTCGG GCATCACCTT CAATGCGGGC GAGGGCGGTG CGGGCTCGGG CGACAGCATC
AACATCCGCG GCTTCAGCGC CAACGCCAAC CTGCAGATCG ACGGGCTGCG CGACAGTGGG
CAGAACAACC GCAGCGACCT CTTCAACACG GAGTCTGTCG AAGTCATCAA GGGCCCGAAC
TCGGTCTTTG GCGGGGCAGG CACCTCGGGC GGCAGCATCA ACATGATCAG CAAGCAGCCC
AAGGCCCATG ACTTCACCGA GGCCGACGCA GGCCTGGGCA CGGCCAGCTA CCGGCGCCTC
ACGCTCGACA CCAACCGTGT GCTGGCTGGC GGCAAGGCCG CCATGCGCCT GAACCTCATG
GGCCATGACA GCGACGTGGC CGGGCGCGAC ACCATCTTCA AGCGGCGCTG GGGTGTGGCG
CCCTCGCTGG CTCTGGGATT GAATTCGCCC ACGCGCGTGA CTCTCAGCTT CTTCCACCAG
AACGATGACA ATCTTCCCGA CTTCGGCGTG CCGGCCTTTC GCGGCAAGAT GCTCGATGGC
GTCTCGCGCA ATGCCTACTT CGGATGGCGC AACCTTGACC GGGAAAAGAT CAGCAAGGAT
GCCCTGACCG CGAAGATCGA GCATGACTTC GCCTCGGGCG CCAAGCTGCA GAACCTCTCG
CGCTACTCGC GGCTGAGCCG CGATACCGTG ATCTCTGCCT CGCATGTCGA TCTCCGGGGC
ATGCAGCCTG GCTACTACCG GCCCGCAGGG CCCCAGGCCT ATGGCCGCGA TGCGGCCACC
ACCCTGTGGA TCAACCAGAC CAACCTGACA CAGCGCTTCG ACACAGGCGT GCTGGGGCAT
ACGCTGATCA CGGGCTTCGA GATCGCGCGC GAGACCTATG ACCGCACCAC CTCTTCCTAC
AACATCAACC GGCAGTTCCC GGCCGGCGGC TATCCGCTGG CCCGTCCGCC CGGATACTGG
ACGGGCACGA CGGACTTGCA AAACAGCGGA AGGAACGAAA CCAGCCTGGA CACCCGCGCG
CTGTATGCCA CCGACTCCAT TGCGCTGGGT CCGCGCTGGG ATCTGAACCT GGGCCTGCGC
TATGACTGGA TCGACGGGCG CTCCAACGCC ACAACGGCCG CTGGCGTGCG CACCGCGGTG
GACAGCTCCG ACGGCCGGCT CAGCGGCCGC ACGGCCCTGA GCTTCAAGCC CGCCGACAAT
GGCCGCATCT ACCTGGCCTA CGGCACGGCC TTCAACCCTT CCGCCGAATT TCTGGTCTCC
ACGGGCTCGG GCCTGGATGC GGCCACGGCC TCGCTGGCAC CCGAGAAGAA CACCAGCCTG
GAACTGGGAG CCAAGTGGGA TGTGCTGGAC CGCCAGCTGG CGCTGACCGG CGCCCTGTTC
CAGGTGGACA AGACCAATGC CCGCGAGCAG ATGGCCGATG GCAGCTATCT GCTGGCCGGA
GAGCAGCGCG TGCGCGGGCT GGAGCTCGGT GCCGCAGGCA AGGTGACGCC GCAATGGGAT
GTCTTCGCCA ACTACACCTT CATGGCCAGC AAGACCCTCA AGTCATTGAA CGAGCCTGCG
CGTGTGGGCC AGGCGCTGGG CAATACGCCG CGCCATTCGC TGAACCTGTG GACCACCTAT
GCATTGCCCC AAGGCTGGAC GGTGGGCTAT GGGGTGCGCT TCGTGGGCAC GCGCAATGTC
ACCTCGGCAG GCGATGGGAA ACTCTCTGCC TATTGGGTGC ACAGCGCCAT GGTCGGCTAT
GAACTCAACC GGCAATGGAA GCTCAGGCTC AATCTCGAAA ACATCGGCAA CAAGGCCTAT
GTGGCCGGCG TGCGCCAGCG CCTGGGCGAG CAGTCGCGTT CCTCGGCCGT TGAATACGGC
GAAGGCCGCA CGGCCAGGGT AACGGCAACC TATCAGTTCT GA
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| Protein sequence | MRTSDCRSRP FVSGPQSCLY SVFAAALVTP AYAQDVSSED RQVQLAPVTV SGPRTTGSRT
EASDSVKYAK PLLDVPQTIT VVPGQVLQEQ NALSLQQALS NVSGITFNAG EGGAGSGDSI
NIRGFSANAN LQIDGLRDSG QNNRSDLFNT ESVEVIKGPN SVFGGAGTSG GSINMISKQP
KAHDFTEADA GLGTASYRRL TLDTNRVLAG GKAAMRLNLM GHDSDVAGRD TIFKRRWGVA
PSLALGLNSP TRVTLSFFHQ NDDNLPDFGV PAFRGKMLDG VSRNAYFGWR NLDREKISKD
ALTAKIEHDF ASGAKLQNLS RYSRLSRDTV ISASHVDLRG MQPGYYRPAG PQAYGRDAAT
TLWINQTNLT QRFDTGVLGH TLITGFEIAR ETYDRTTSSY NINRQFPAGG YPLARPPGYW
TGTTDLQNSG RNETSLDTRA LYATDSIALG PRWDLNLGLR YDWIDGRSNA TTAAGVRTAV
DSSDGRLSGR TALSFKPADN GRIYLAYGTA FNPSAEFLVS TGSGLDAATA SLAPEKNTSL
ELGAKWDVLD RQLALTGALF QVDKTNAREQ MADGSYLLAG EQRVRGLELG AAGKVTPQWD
VFANYTFMAS KTLKSLNEPA RVGQALGNTP RHSLNLWTTY ALPQGWTVGY GVRFVGTRNV
TSAGDGKLSA YWVHSAMVGY ELNRQWKLRL NLENIGNKAY VAGVRQRLGE QSRSSAVEYG
EGRTARVTAT YQF
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