Gene Daci_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3295 
Symbol 
ID5748880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3612234 
End bp3612710 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content71% 
IMG OID641298399 
Producthypothetical protein 
Protein accessionYP_001564318 
Protein GI160898736 
COG category[S] Function unknown 
COG ID[COG3807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.164661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTGCA ATCAACGCCG TGCCGCCCGC TGGCTGGCCG CAGCCGCCAC CGCCCTCGCC 
GTCCTCACCA CCACCCTGGC CCCGGCCGTC GCCCATGCGC GCGAGTTCGT CAGCGTCAAG
GGCACCAGCG TCAATGTGCG GCAGCAGCCC ACCACGCGCT CGGCCACGCT GTGGGAGCTG
GGCAAGGGCT ATCCGCTGCA GGTGGTGCAG CGCAAGGGCC AGTGGCTGCG CGTCAGGGAC
AACGAGAGCA CGCTGGGCTG GGTGCATGCG CCGCTGACCG GCAAGACCCC GCACATGGTG
GTGACCGGAC GCACCGCCAA CCTGCGCGCT GGCCCGGGCC AGAACCATCG CGTGGTGGGC
AAGCTGGCTG AAATGGAAGT GGTGCGCACG CTCAGGAAAC AGGGCTCCTG GGCCCAGGTC
CAGCGCGACA ACGGCCAAAA GGGCTGGGTG GCGCGCAGCC TGACCTGGGG CTGGTGA
 
Protein sequence
MPCNQRRAAR WLAAAATALA VLTTTLAPAV AHAREFVSVK GTSVNVRQQP TTRSATLWEL 
GKGYPLQVVQ RKGQWLRVRD NESTLGWVHA PLTGKTPHMV VTGRTANLRA GPGQNHRVVG
KLAEMEVVRT LRKQGSWAQV QRDNGQKGWV ARSLTWGW