| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3282 |
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| Symbol | |
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| ID | 5748867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3595165 |
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| End bp | 3596397 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298386 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001564305 |
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| Protein GI | 160898723 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.68571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.617182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA CGCAGCAACG CTGGAAAGCC ATCGCCGTGG CGGTGGTCCT GTTGGCGGCG
GCCGGGGGCG CGGCCGCCTG GTGGTCCAGC CGGCCTGCCG TGGCCTACCA GACCGAGACC
GTGGCGCGCA CCGATATCGA GTCCACCGTC ACGGCCATCG GCACGCTGCA GCCACGCCGC
TATGTGGACG TGGGCGCCCA GGTGTCGGGC CAGGTCACCC GGCTGCGCGT GGAGCCCGGC
GCCCAGGTGG AGAAGGGCGC ACTACTGGTG GAGATCGACC CCAGCGTGCA GCGCGCCACG
GTGGATGCGG GGCGTGCCTC GCTGGCCGGC CTGCGCGCAC AGCTGGCCGA GCAGCAGGCG
CTGCGCAAGC TGGCCGAGCA GCAGCTCACG CGCCAGCGCC AGCTGGCCCG CGACGGGGCC
ACGCGCGAGG AAGACCTGCA GACCGCAGAA GCCAACCTGG CCGCAGCCGG CGCCCGCATG
GAGCACCTGA AGGCCCAGAT CGACCAGACC CAGGCCACGC TCAAGGCCGA CGAGGCGCGC
CTGGGCTATA CGCGCATCTA CGCGCCCATG GCGGGCACCG TGGTGTCGGT GGAGGCGCGC
GAGGGCCAGA CACTGAACGC CACCTACCAG ACGCCCAACA TCCTGCGCAT TGCCGACCTG
TCGGCCATGA CGGTGTGGAC CGAAGTGTCC GAGGCCGACG TGCGCCGCGT GCGCGACGAT
ATGCCGGTGT ACTTCACCAC GCTGGGCGGC GCCGACCAGG CCAGGCCCCG GCGCTGGTCC
AGCAAGGTGC GCCAGGTGCT GCCTTCGCCC TCTGCCAGCC AGGCGCCGGC CGGCGGCAAT
GCGGGCCAGG CGCCTGCGCC CGCCACCAAG GCCGTGGCCT ATACCGTGCT GTTCGATGTG
GACAACGAGG ACGCCGAGCT GATGCCCCAG ATGACGGCCC AGGTGGTCTT CGTCACCGGG
CAGGCCGCGC AGGCGCTGAC CGTGCCGCTG ATGGCCGTGG CCGACAAGGC GGGAACGACT
GACAAGGCGG AAAAGGCAGA GAACGCCGAG AAGGCAGGCA GCACGCAGAC CGTGCGCGTG
CTGGACGCCA AGGGCCAGCC CGAGCAGCGC ACCGTGCGCC TGGGCGTGCG CAGCCGCCAC
CAGGCCGAGG TGCTGGAGGG CCTGCAGGAA GGCGAGCGCG TCATCGTCGG CGAGACGCCT
CTGGACCGTG GCCTGCGGTG GCTGCAATGG TGA
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| Protein sequence | MTRTQQRWKA IAVAVVLLAA AGGAAAWWSS RPAVAYQTET VARTDIESTV TAIGTLQPRR
YVDVGAQVSG QVTRLRVEPG AQVEKGALLV EIDPSVQRAT VDAGRASLAG LRAQLAEQQA
LRKLAEQQLT RQRQLARDGA TREEDLQTAE ANLAAAGARM EHLKAQIDQT QATLKADEAR
LGYTRIYAPM AGTVVSVEAR EGQTLNATYQ TPNILRIADL SAMTVWTEVS EADVRRVRDD
MPVYFTTLGG ADQARPRRWS SKVRQVLPSP SASQAPAGGN AGQAPAPATK AVAYTVLFDV
DNEDAELMPQ MTAQVVFVTG QAAQALTVPL MAVADKAGTT DKAEKAENAE KAGSTQTVRV
LDAKGQPEQR TVRLGVRSRH QAEVLEGLQE GERVIVGETP LDRGLRWLQW
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