| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3270 |
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| Symbol | |
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| ID | 5748855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3580279 |
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| End bp | 3582774 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298374 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001564293 |
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| Protein GI | 160898711 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0050464 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCTCC GGCCCGGCAT GCGCAGCGTG GCGCGCACTC CCTCCCCCTT GCTCTTTTCA
CTGTCCCGGA CAGGCCTCGC CGCGCTCATG GCAGCGGGCC TGGCGGCAGG CGCCGCCTTG
CCACGCGCCG CGCTGGCCCA GGCCGGTGCG GCGGCCACCG GCGCGGTGCA GCGTCCGTTC
CAGGTGCCGG CAGGCCCGCT GGCCGCCGCG CTCACGGCGT TTGCCGCTGA CGCAGGCGTG
AGCATCAGTG CGCCGCCCGC CCTGGTGCAG GGCCGGCGCA CCCAGGGCGT GCAGGGCCGC
CTCACGGTGC GCGAGGCGCT GGACCGGCTG CTGGCCGGCA CCGACCTGCA GGCGCAGGCG
GCGGGGGAGG GCGGTTTTGT GCTGCGTGCG GTGCCCGAGG CCAACCAGGC ATCGACCGTG
CTGGGTGAGG TCAGGGTGAC CGCCGCGGCC CCGGCAGAAA GCCCCTGGGG CAGCACCAGC
GGGTATGTGG CGCGCCGGGC CAGCACGGCC ACCAAGACTG ATGCCTCGAT TCTGGAGGTG
GCGCAATCGG TGTCCGTCAT CACGCGCGAC CGCATGGACG ACCAGGGCGT GCGCACGCTC
AACGACGCCG TGCAGTACAC GGCCGGCGTG CGCACCAACA CGGGCGGGGC TAATCCTGCG
GACGACAGCC TGTCGGTGCG CGGCTTCAGC CAGTTCTCGG GCAATTTCTA CCTGGACGGG
CTGCGCCTCA TGCCGCTGGG CACGCTGGGC TTTTTCGGCA TGGAGCCTTA CGGGGCCGAG
CGCATGGAGG TCCTCAAGGG GCCGGCCTCG GTGCTGTATG GCCAGAACTC GCCGGGCGGC
ATCGTGAACT TCGTGTCCAA GCGGCCTTCG GCCGATCCGG TGCGCGGCAT GGAGTTGTCC
GTGGGCAGCC ATGCTCGCCG GCAGGCGGCC TTCGACCTCG GAGGGCCGGT GGGTGACGAT
GGCACGGTGA GCTATCGCCT GGTGGGGCTG GCCAGGGCGG CCGACCAGCA GATCGACTTC
ATGCGTGATG ACCGCGTCTA CCTGGCGCCC AGCCTGACCT GGGCGCCGGA CGCGCGCACC
AGCGTCACGC TGCGCGGCTT CTACCAGAAG AACCACGCCA TGATGTCCAC CAACGTGCAG
TGGGATGCGC TCAACGGGCG CAACCCCAAT GGCCGGCTGC CCCTGAACCG CTTCCTGGGG
GAGCCGGGCT TCGACCGTGA AGAGACCGAG GTCGCATCGC TGGGCTACGA CGCACGGCAC
GAATTCGACA GCGGCTGGAC GCTGCGTCAG AACTTCCGCT ACCTGCACGC ACGCAACCAC
GAGCAGTACA TGTTCCGCTA CGGGCCGCTG ATCGACGGCT CCATCACCAA CCGGGAGATC
GATTCGCGCG ATGGCAAGGG TGGCGTCTAC ACCGTGGACA CCAGCCTGTC GGGCCAATTC
GCGGCGGCCG GCCTGCAGCA TGAACTCATC GTGGGGCTGG ACTACAACCG CAGCCGCTCC
AGTTTCGACT CCTATATCGC CGACGGGCCG CAGCTGGACA TCTACCGGCC CGTCTATGGC
AGCTTCATCG ACACCTCGCT GCTGCAGCCC GATGCGCTGC GCGATGAGCG CGCCCAGCAG
GTGGGCCTCT ACGTGCAGGA CCGCATCCGC AAGGACCGCT GGGTGCTGGC CCTGGGCGGA
CGCCACGACT GGAGCCGCCT GGAGCAGACC AGCCGCCTGG CCGACCCCGT GTCCACCAGC
GTGCGCAAGC CCAAATCCTT CACCGGCCGT GTCGGCCTGA CCTATCTTGC AGACAATGGC
GTGGCGCCCT ATGTCAGCTA CAGCGAGTCG TTTGTCCCTC TGATGGGCGC TGACCGCAAC
GACCGGCCCT TTGATCCGGA AACCGGCAAA CAGGTCGAGG TCGGCGTCAA GTACTCGCCC
GACGAGCGCA GCAGCTTCAC GCTGGCCGCC TTCGAGCTGC GCCGGCAGAA CGTGCTCACC
ACCGACCCCG AGAACGTCCG CTATTCCATA CAGCAAGGCG AAGTGCGTTC TCGCGGCATC
GAGTTCGAGG CGGCAGTCCA GCCCATGCGC GGGCTCAAGC TCCTGGCCGC GCTGACCTAC
AACCCCGTCA AGGTGACCCG GGCCCAGCCA GACCAGTGGG GCGGCAACGT GCAGGGCAAG
TCGCCTTACG AAGTGCCCCG CAAGATGGCG TCGGCCTGGG TGGACTATGC CTTTGGGGGC
GACCTGCTGG GGCTGGGGGC GGGCGTGGGG GCACGCTACA TCGGCTGGAG CTGGGGCGAT
GCGGACAACA GCTTCCGCGT ACCGTCGTTC ACCCTGGTGG ATGCCTCGCT GCGCTATGAC
CTGGGAAAGA TGCGCAGTGA CTGGCGCGGG GCCAGCGTGA GCCTGACGGT CAAGAACCTG
TTCGACAAGT ACCACACGGC GTCGTGCTTT TCCGCCAATG CCTGCAACTA TGGCGAAGCG
CGCAACATGG TGGTTCGGTT CGGGTACATC TGGTAG
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| Protein sequence | MALRPGMRSV ARTPSPLLFS LSRTGLAALM AAGLAAGAAL PRAALAQAGA AATGAVQRPF
QVPAGPLAAA LTAFAADAGV SISAPPALVQ GRRTQGVQGR LTVREALDRL LAGTDLQAQA
AGEGGFVLRA VPEANQASTV LGEVRVTAAA PAESPWGSTS GYVARRASTA TKTDASILEV
AQSVSVITRD RMDDQGVRTL NDAVQYTAGV RTNTGGANPA DDSLSVRGFS QFSGNFYLDG
LRLMPLGTLG FFGMEPYGAE RMEVLKGPAS VLYGQNSPGG IVNFVSKRPS ADPVRGMELS
VGSHARRQAA FDLGGPVGDD GTVSYRLVGL ARAADQQIDF MRDDRVYLAP SLTWAPDART
SVTLRGFYQK NHAMMSTNVQ WDALNGRNPN GRLPLNRFLG EPGFDREETE VASLGYDARH
EFDSGWTLRQ NFRYLHARNH EQYMFRYGPL IDGSITNREI DSRDGKGGVY TVDTSLSGQF
AAAGLQHELI VGLDYNRSRS SFDSYIADGP QLDIYRPVYG SFIDTSLLQP DALRDERAQQ
VGLYVQDRIR KDRWVLALGG RHDWSRLEQT SRLADPVSTS VRKPKSFTGR VGLTYLADNG
VAPYVSYSES FVPLMGADRN DRPFDPETGK QVEVGVKYSP DERSSFTLAA FELRRQNVLT
TDPENVRYSI QQGEVRSRGI EFEAAVQPMR GLKLLAALTY NPVKVTRAQP DQWGGNVQGK
SPYEVPRKMA SAWVDYAFGG DLLGLGAGVG ARYIGWSWGD ADNSFRVPSF TLVDASLRYD
LGKMRSDWRG ASVSLTVKNL FDKYHTASCF SANACNYGEA RNMVVRFGYI W
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