Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3254 |
Symbol | |
ID | 5748838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3557486 |
End bp | 3558298 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641298357 |
Product | prophage antirepressor |
Protein accession | YP_001564277 |
Protein GI | 160898695 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000711854 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000000000707487 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCAACA TCACGCCATT CAAATTTCAG GACCACGAAA TCACTGTGCT GACGAATGAC AGTGGAGAGC CCTGGTTCAT TGCAAAAGAA GTGTCGGGCG TTCTCGGCTA CTCCGAAGCC AGCGCCATGA CGCGGACTCT TGACGACGAT GAGAAGGGTC TGCAGGTTTT GCAGACCCAA GGCGGAACCC AGCGCGTGAT CGTGATCAAC GAATCGGGCC TGTATTCCGC AATTCTCAAG AGCGAGCGCC AGGAGGCCAA GCGGTTCAAG AAGTGGGTGA CCAGCGAGGT TTTGCCATCG ATCCGGCGCA CTGGCAGCTA CACCGGTCCG GCAGCCCAGC AGATGGCCGC GCCCCTGCGC GATCAGGTGG ACGCCGGCAT CCTCTTGCTG CGCGCTGCGG CCGAAGACCT GAAGTTCGCC CCGTCCGCCG TTCTCGGCGG CTATCAGAAG CTGGAGAGCC ACGTCGGCGT GGCCGGCCTT CTGCCCGCCT ATGCGGTTGA CGCGCCGGCC TCTGCTGCCG CCGGCACCAG CGAACCCACC AAGTCCCTGG CGGAACTGCT GAAGGAGTTC GGTGTGGGAA TCAGCGCCCA GGCCTTCAAC AAGCTGCTGA TGCAGCGCGG GATGCTGAAG GAGCAGGAGC GCCAGTCCTC CCGTGGCGCG GGTGTGAAGA AGTTCAAGGT CTGCACGGCG CTGGAGTTCG GGAAGAACCT GACCAGCCCG AGCAATCCGC GCGAGACGCA GCCGCACTGG TACGTGAGCA AGTTCGCTGA ACTGCTGGAT CTGGTGATGC CTCCAAAGGC CCGATCCGCC TGA
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Protein sequence | MSNITPFKFQ DHEITVLTND SGEPWFIAKE VSGVLGYSEA SAMTRTLDDD EKGLQVLQTQ GGTQRVIVIN ESGLYSAILK SERQEAKRFK KWVTSEVLPS IRRTGSYTGP AAQQMAAPLR DQVDAGILLL RAAAEDLKFA PSAVLGGYQK LESHVGVAGL LPAYAVDAPA SAAAGTSEPT KSLAELLKEF GVGISAQAFN KLLMQRGMLK EQERQSSRGA GVKKFKVCTA LEFGKNLTSP SNPRETQPHW YVSKFAELLD LVMPPKARSA
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