Gene Daci_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3187 
Symbol 
ID5748771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3509506 
End bp3510408 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID641298290 
Producthypothetical protein 
Protein accessionYP_001564210 
Protein GI160898628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.589109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCACA CGTCATCTTC TCACAGTTCG CGCACGCCAC TGCTCAGCCG GCAGGAGCTG 
GCCCTGATAG CCGTCACCAT GGTCTGGGGC GGCACCTTTC TCGTGGTCCA CCTGGCCATG
CAGCACAGCG GGCCGCTGTT CTTTGTGGGC CTGCGCTTTG TCACGGCGGG TTTGATCGGG
CTGCTGGTGT TCCGCAAGGC CATGGCCGGG CTCACGCGCA CCGAGCTGGT GGCAGGCATC
GCCATCGGCA CCAGCATCTT CCTGGGCTAT GGCCTGCAGA CCTTCGGGCT GCAGACCATC
AGCAGCAGCA AGTCGGCGTT TCTGACGGCG CTGTATGTGC CGCTGGTGCC TCTTGTGCAA
TGGCTGGTGA TGGGCAAGCC CCCGCGATTG ATGAGCTGGA TAGGCATTGG CCTGGCCTTC
ACGGGACTCA TGCTGGTGGC GGGACCGGAG TCCGGCGGCA TGGAGTTGAA CGTGGGCGAG
ATGGCAACCA TGCTGAGCAC GCTGGCTATT GCGGCCGAGG TGCTGCTGAT CGGGCATTTC
GCGGGCAAGG TCGATGCGCG GCGCGTGACC ACGGTGCAGT TGCTGGCGGC CGGCGTCATG
GCGCTGCTGG CCATGCCGGT GTCGGGCGAA TCCGTGCCCG ATTTCTCATG GGTCTGGCTG
TCCGCCGCGG TGGCCATGGC CTGCGCCAGC ATCCTCATCC AGCTGACCAT GAACTGGGCC
CAGAAGTCCC TGTCGCCCAC GCGTGCGACC GTGATCTATG CAAGCGAGCC GGTCTGGGCC
GGCATCGTGG GACGCATGGC CGGCGACCGG CTGCCGGGGC TGGCAATTCT GGGGGCTGCG
CTGATCGTGG GCGGGGTGCT GGTCAGCGAG CTGCGCCTGG GCAGGCAAAC ACCCAAGCCG
TAA
 
Protein sequence
MLHTSSSHSS RTPLLSRQEL ALIAVTMVWG GTFLVVHLAM QHSGPLFFVG LRFVTAGLIG 
LLVFRKAMAG LTRTELVAGI AIGTSIFLGY GLQTFGLQTI SSSKSAFLTA LYVPLVPLVQ
WLVMGKPPRL MSWIGIGLAF TGLMLVAGPE SGGMELNVGE MATMLSTLAI AAEVLLIGHF
AGKVDARRVT TVQLLAAGVM ALLAMPVSGE SVPDFSWVWL SAAVAMACAS ILIQLTMNWA
QKSLSPTRAT VIYASEPVWA GIVGRMAGDR LPGLAILGAA LIVGGVLVSE LRLGRQTPKP