Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3174 |
Symbol | |
ID | 5748758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3494688 |
End bp | 3495497 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298277 |
Product | YaeC family lipoprotein |
Protein accession | YP_001564197 |
Protein GI | 160898615 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0987485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00336429 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGC GCGCATTGCT TCAATCGCTG GCCCTGGCCG CCGTCCTGCC GCTGGCGGGA ATGGCCGCGC TGCCGGCCCA TGCGGCCGAC GGCTCGGTCA CCATCGGCGT GACCTCGGGC CCGCATGCCC AGATCGCCGA GGTGGCCAGG AAGGTGGCCG AGAAGAACGG CCTGAAGGTG AAGCTGGTCG AGTTCGGCGA CTTCATCCAG CCCAACGCTG CCCTGTCGCA GGGCGAGCTG GACGCCAACA TCTACCAGCA CCAGCCCTTC ATGGACGCCC AGAACAAGGA CCGCGGCTAC AAGCTCGTGC CCGTGGCCCG TGCGGTCAAC CAGCAGATGG GCGTGTACTC CAAGAAGATC AAAAGCCTGG CCGACCTCAA GAGCGGTGCG CGCGTGGGCA TCCCCAACGA CCCCACCAAC GGCTCGCGCG CACTGATGGT GCTGGCCGCG CAAAAGCTGA TCGAACTGAA GACCGGCGCG GGCGCCCGTG CCTCGGTGCT GGATATCACG GCCAATCCGA AGAAGCTGAG GTTCGTCGAG CTGGAGGCCG CCCAGCTGGC GCGCTCGCTG GACGATCTGG ACGCTGCCGC CGTCAACAGC AGCTACGCCG TGGCCGCAGG CCTGTCGCCG CAAAAGGATT CGCTGGCGCT GGAAGCCACG GACACGCCGT ACGTGACCGT GCTGATCGCC ACGCGCGCGG GCCATGAGAA GGACGCGGGC CTGCAGGCCT TCGTCAAGGC CTACCAGTCG CCCGAGGTGC GCCAGTTCAT CGACACGCAG TTCAAGGGCG CCTACACGGC GGCCTGGTAA
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Protein sequence | MKKRALLQSL ALAAVLPLAG MAALPAHAAD GSVTIGVTSG PHAQIAEVAR KVAEKNGLKV KLVEFGDFIQ PNAALSQGEL DANIYQHQPF MDAQNKDRGY KLVPVARAVN QQMGVYSKKI KSLADLKSGA RVGIPNDPTN GSRALMVLAA QKLIELKTGA GARASVLDIT ANPKKLRFVE LEAAQLARSL DDLDAAAVNS SYAVAAGLSP QKDSLALEAT DTPYVTVLIA TRAGHEKDAG LQAFVKAYQS PEVRQFIDTQ FKGAYTAAW
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