Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3089 |
Symbol | |
ID | 5748673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3408065 |
End bp | 3408754 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641298192 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_001564112 |
Protein GI | 160898530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00529364 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAG ATGGTTGGCT CCTAACAGCC GCGCACTGCC TATTCGATAA GACTGGCGCG CGCATCGCCC AGGACAAGCT CATCGTGTAC ATGCCGTTCC AGGGTAGTTC CGAACAGGCG ATGGCGGCGC AGGCACTTAA CAGAAACCTG CGATCCTTCT CCGTCGTCCC GGGCAGTGCA ACGTTGTACG ACGTCGAATT CCAGCCCAGC AAGCTCTATG ACTTCGAGTC TGCAAAAGAC CTCGCTGTGC TGCGAGTGTC CGTCCCCGCG GGTAGTGCCA CGTGGCGGCC AGTCGTACTG CGCACTGCGA ACAAGGACAT GCCGTTTACG AGTGCGGGGT ATGGGCTGAC GAATGCGGCC GATCCAGGAG TTGACGGAAG TACGCTCGAA ATCACGCGAC GCACTGCTGA CGTTCGGGTA TTCCCTAAGT ACCTGCTGTA CGAGTCGGTC AGCACCAAAG GCATGGGCCG CGTTTGCGCG GGTGACTCCG GAGGCCCCGT GTTCGCCGGC GAGCTTAATG GCGGCCCCAA GCCTCCTGAG CACGAGCTCG TTGGCGTCGT CAGCGGCTCC ACTGCTACGG GCCAGTCCGT CGCATACTGC CGCGCTGGAA ACCAGTACAT AGTTCGTGTG AACACCACCG AGGTCGCTCA GTGGATGTGC AGCTCCACCA AGAAGGCAAT CTGCTATTGA
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Protein sequence | MLKDGWLLTA AHCLFDKTGA RIAQDKLIVY MPFQGSSEQA MAAQALNRNL RSFSVVPGSA TLYDVEFQPS KLYDFESAKD LAVLRVSVPA GSATWRPVVL RTANKDMPFT SAGYGLTNAA DPGVDGSTLE ITRRTADVRV FPKYLLYESV STKGMGRVCA GDSGGPVFAG ELNGGPKPPE HELVGVVSGS TATGQSVAYC RAGNQYIVRV NTTEVAQWMC SSTKKAICY
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