| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3081 |
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| Symbol | |
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| ID | 5748665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3399091 |
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| End bp | 3399744 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641298184 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001564104 |
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| Protein GI | 160898522 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.450994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.856151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGA AACTGCGCAT TGCTGTCGTG GACGACCACG CCGTGGTCCT GCTTGGCGTC
AAGGACTTCC TGGAGCAGGA CCCCAATCTC CAGGTCGTGG CCACGTTCAG CACGCCATCG
TCCTTGATGC AATACGCCAG ATCGAACCCG CTGGACGTGG TTCTGACCGA CTACTCCATG
CCGGGCGACG ATGTCTATGG CGATGGCCTG CGCTACGTGG ACTATCTGAT ACGCCACTTC
CCGGACATCA AGGTGCTGGT GCTGACGACC GTCTCCAACC CCATGATCAT CTCGGCCCTG
TATGACGCCG GCGTCGCCGG TGTGCTGCTC AAGGAAGACC CGCTCACCCA GATCATGGCG
GCGCTGCAGT GTGTCCGCCT CAATGCCCGC TACTATTCGC CCTCATTCCA GGCCGACACG
CCCAGGCAGG AGCGGTCCGT TTTCCTGGCC GAGCGCGCCA ACAGCCTCTC GCCGCGCGAG
TTCGAAGTCC TCAGGCATTT CGCCAATGGT GAGTCCATCA CCGAAATCGC CGCACGCCTG
CGGCGCAGCG TCAAGACCGT CAGCCTCCAG AAGAACTCCG CCATGCGCAA GCTGAACGTG
GACAGCAACC AGGACCTGGC GGCCTTCTGC GCCGAGCACC ATCTTTTCGA CTGA
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| Protein sequence | MKLKLRIAVV DDHAVVLLGV KDFLEQDPNL QVVATFSTPS SLMQYARSNP LDVVLTDYSM
PGDDVYGDGL RYVDYLIRHF PDIKVLVLTT VSNPMIISAL YDAGVAGVLL KEDPLTQIMA
ALQCVRLNAR YYSPSFQADT PRQERSVFLA ERANSLSPRE FEVLRHFANG ESITEIAARL
RRSVKTVSLQ KNSAMRKLNV DSNQDLAAFC AEHHLFD
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