| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3080 |
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| Symbol | |
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| ID | 5748664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3395806 |
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| End bp | 3399072 |
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| Gene Length | 3267 bp |
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| Protein Length | 1088 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298183 |
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| Product | histidine kinase |
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| Protein accession | YP_001564103 |
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| Protein GI | 160898521 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0169759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.77184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACT CCCCGTTCAG CAAGATCACA CGCACCACAC GCTGGCAGAA CCGGGTACTG
TTTGGAGTGC TTCCCCTTGC GATCTTCCTC ATCGCCGTGC TGCTGTGGGG CTCTGAGAGG
ATCTTCGAGC AGGAGCAGGG CCGCCTGGCC TTGAACTTCT CCGCCATCGT CGGCTCGCTG
CAGGAGCAGG AGATCTTTCT TCGGCGGCTC AAGGGCCGCA ACGAGTCCTG GAAAGCGCTG
CCGGACCAGA GGATAGCCAC CATCGTCGAC GTGCCCGCTC CTGCGCAGGC GGACTACCGC
ATGTTCCGTG GCCGCGAGGC CATCGGCGGC ATTCCCTTTT CACTGCAATG CTCTGCGCGC
GTGGCCTGCG ACACGCTCCC GGACCGGCTT TTCTCGCTGG GCAGCTCCCT GGCCGCGGGC
TATTCCTCCT TCTGGGCAGG CTCCTACTTC CCTGCAGCCG CTGCCTTCTT CACCAAGGAG
GACGGGGCGA TCAGCATCGG CGTGCCGGCC ATCGACGTGC CCATCGGCAA CGAGAGCGTC
ACGCAGGAAA TGTTCGACAG CACGATTGCC GCCGTCAAGG CGCATCTGCG GGCCAGGGCC
GCCGATGCCC GGCCGGGCGC CGGCTCCACG GCGCCGGCGC AGGAGATCGT CTGGTTCCGG
TCGCCCCAGT TCCCGGAAAA GATGATCGGC ATGGTCGCCG CCGGCTTTTC AAGCCATATC
GATGCCGGCG ACGAAGCCGC CGCAAGCCCG ATCTACGCTG CCATCCTTTT CAGCCGCCAG
CGCATCAGCG CCATAGAAAG AACCATCCAT ACGCTGCCCA GGCATCTTTT CTGGCTGGAG
CACCGGGATT TCGGCGTGCT CATGGGCACC GGCCCCGTCC CGCAAGTGGA CGAGGCGGGG
ATGCGGTACA CGCGCAATGG CCTGATCCTC AAGACCGAAG ATGCCTCCGG CCGGTGGACC
GGCTACTACC AGGTGGACTA CGCCACCTTT TTCCAGGGCC GGCTGTTCGC CCCTTCTGCC
GGCCTGGTGC TGGCCCTGCT GCTGAGCCTG CTGGCCGGTA TTGCCTATAC CCGCTGGTTC
AACCGCAAGG TGATTGCGCC TGCGCAGGAA GCGCAGCGGG TCATCGTCGA GAGCAATCAA
TTCAACAGGA CGCTGATCGA AACCGCCCCC GTGGCTGTCT GCCTTGTGGC CTACGGCAGT
GGAAAGATCA TCTTCAGCAA CTCGCTGGTG CAGGAGTGGC TGCACTCGGC CGATGGCTAC
CTGCGCCCCG GCTCGCCGGA AAACAGGGCG GCGCTGGATG AAATTGTCCA CGCCAGGGCC
GCAGGAACCA TGGAGCAACT GGTCACCGCG CAGGGCCGAA CGCTTTACGT GGCCTACGCG
CCCACCCGCT ACCTGGGCCA GGATGTGACG CTGTGCGTTT TTGCCGACGT AAGTGCGCGC
GCAGAAATCG AGAGCAATCT GGAGCGGGCA AGAATCGCGG CGGACGAGGC CAACGAGGCA
AAGTCCACCT TTCTGGCGAC CATGAGCCAC GAGATCCGCA CGCCGCTGTA TGGCGCGCTG
GGCACGCTGG AGCTGCTGGG CCTGACCGAG CTCACGCAGC TGCAGCGCAA GTATGTGGAC
CGTATCGAAG CCTCCTCGTC CATCTTGCTG CAGATCATCA GCGACATCCT GGACACCAGC
AAGATCGAGG CGGACCAGTT GCAACTGGAA AAGGCTCCGT TCAATCCCCG GGAGCTGGTG
CAAAACTGCA CCAGCTCCTA TGCCGCCATG GCGCAGCAAA ACGGCCTGCT GCTGTTTTCC
TGCGTGGACG CGCAGGTGCC CGAGTCGGTG CTGGGAGACG CGGTGCGCAT CCGCCAGATC
CTGGGCAATC TCATCAGCAA TGCCATCAAG TTCACGGAGG CCGGCCATGT GATCGTCCGC
CTGCGCAGCG TGCCGGGCAC GGCCTCCCAG GTCCGGCTGG TGTTCGAGGT CTGCGACACG
GGCGTGGGCA TAGAGAAATC CCTGCATGGG GAGCTTTTCA CGCCCTTTTA TCTGGTCAAG
AACAGCAGCC GCACCGCCCG TGGAGCGGGC CTGGGCCTGT CCATCTGCTG GAGCCTGGCC
CGGATGATGT CCAGCTCCAT CGAGGTCTGG AGCGAGCCCG GGCTGGGCAG CCGGTTCTGG
TTCGAGCTGG GGCTGGAGAC CGTCGCGCAG GAGGAGGAGC AGGAGGAGGC TCCCGCGCTA
CAGGGCGCCC GCATCGCGGT GCGCACCCCC CACCCGGAAC TGACGGACAA CATCTGCGCC
TGGCTGCAGC GCTGGGGCGG CCAGGCCCGC GCGGCGGGCG CCGCCCCGGT GGCGGCCCAT
GACGATGAGC TGCTGCTGGA CGTCCTGCTG CCGGCGGACA GCCCCGCGCC CGGATGGATG
GGGCCGCACC TGAACCTTTC CTCGCCGGAC AACCGGGGCA TCGACGGGCA CAACGTTCTG
AGCATCGGCT TGGGCATTGC GCAAGTGCTC GGTGGCGCAC AGCGCTCGGC CGGCTTCGGC
TCCGATCTGC CCCTGTTCGA CCTGCGCGTG CTGGTCGCCG AGGACAATCC CGTCAACCAG
GTGACGCTGC GCGGCCAGCT CGAGAGCCTG GGCTGCGAAG TCACGGTCGC CGACGACGGC
GAGGAGGCGC TGGCGCTGTG GGACATCAGC CCGCACGATC TGGTGCTGAC GGACGTGAAC
ATGCCCTACC TCAACGGCTA CGAACTGGCG GAGCGGCTGC GTGCGGAGGG CGTTGCCTGC
CCCATCGTCG GCGTGACCGC CAATGCCATG CTGGACGAGG AAAACCGCTG CCTGGATGCC
GGCATGAATG CCTGGCTGGT CAAGCCCATC CCGTTGCGCA CGCTGGTCCG CACCCTGGAG
AAGTTCGCGC CGAAAAAGCG GCTCCGCCCG GCGCCTGCCC AGGCCGATAC CCCGGTGGGG
GATACCCCGC AGCCTGCGGC CCTGTCGGAG CCCAACGTGC TGCAGACGCA CCGGCAGGTC
TTCGTGCAGT GCATGAACGA CGACATCGCA ATGCTGGCCC GTGGCCTGGA GGAGCACCGG
CCCGACCTGG CCGCGCAGGC GCTGCATCGC ATGCGCGGCG CCTTGCTGCT GGCCAGGATG
CAGGAGCTTG CCGCGCGCAC CCAGTCGCTG GAGGACCAGC TCCCGAACGG CACCCGGGAG
CCCGGCCTGC AGGCCGCGCT GTCAGTCCTG CTGGCCGACC TCTTGGCCGA CCTTCGCGCC
ATGATGGCGC AATTGCCCCA GCCCTAA
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| Protein sequence | MPDSPFSKIT RTTRWQNRVL FGVLPLAIFL IAVLLWGSER IFEQEQGRLA LNFSAIVGSL
QEQEIFLRRL KGRNESWKAL PDQRIATIVD VPAPAQADYR MFRGREAIGG IPFSLQCSAR
VACDTLPDRL FSLGSSLAAG YSSFWAGSYF PAAAAFFTKE DGAISIGVPA IDVPIGNESV
TQEMFDSTIA AVKAHLRARA ADARPGAGST APAQEIVWFR SPQFPEKMIG MVAAGFSSHI
DAGDEAAASP IYAAILFSRQ RISAIERTIH TLPRHLFWLE HRDFGVLMGT GPVPQVDEAG
MRYTRNGLIL KTEDASGRWT GYYQVDYATF FQGRLFAPSA GLVLALLLSL LAGIAYTRWF
NRKVIAPAQE AQRVIVESNQ FNRTLIETAP VAVCLVAYGS GKIIFSNSLV QEWLHSADGY
LRPGSPENRA ALDEIVHARA AGTMEQLVTA QGRTLYVAYA PTRYLGQDVT LCVFADVSAR
AEIESNLERA RIAADEANEA KSTFLATMSH EIRTPLYGAL GTLELLGLTE LTQLQRKYVD
RIEASSSILL QIISDILDTS KIEADQLQLE KAPFNPRELV QNCTSSYAAM AQQNGLLLFS
CVDAQVPESV LGDAVRIRQI LGNLISNAIK FTEAGHVIVR LRSVPGTASQ VRLVFEVCDT
GVGIEKSLHG ELFTPFYLVK NSSRTARGAG LGLSICWSLA RMMSSSIEVW SEPGLGSRFW
FELGLETVAQ EEEQEEAPAL QGARIAVRTP HPELTDNICA WLQRWGGQAR AAGAAPVAAH
DDELLLDVLL PADSPAPGWM GPHLNLSSPD NRGIDGHNVL SIGLGIAQVL GGAQRSAGFG
SDLPLFDLRV LVAEDNPVNQ VTLRGQLESL GCEVTVADDG EEALALWDIS PHDLVLTDVN
MPYLNGYELA ERLRAEGVAC PIVGVTANAM LDEENRCLDA GMNAWLVKPI PLRTLVRTLE
KFAPKKRLRP APAQADTPVG DTPQPAALSE PNVLQTHRQV FVQCMNDDIA MLARGLEEHR
PDLAAQALHR MRGALLLARM QELAARTQSL EDQLPNGTRE PGLQAALSVL LADLLADLRA
MMAQLPQP
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