Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3071 |
Symbol | |
ID | 5748655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3383080 |
End bp | 3383796 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641298174 |
Product | two component transcriptional regulator |
Protein accession | YP_001564094 |
Protein GI | 160898512 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000985444 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CGCGCCGCGT ACTTCTCGTC GAGGACGACG CCCATATCGC CGACCTGCTC ACGCTGCACC TGCGCGACGA AGGCCTGGAA GTCATGCACT GCGCGCGTGG CGACGACGGC CTGCGCCAAC TGGAGCGCGG CGGCTGGGAC GCGCTGGTGC TGGACATCAT GCTGCCCGGC GTGGACGGCC TGGAGATCTG CCGCCGCGCC CGCGCCATGG CGCGCTACAC GCCCATCATC ATCATCAGCG CGCGCTCCAG CGAGGTGCAG CGCATCCTGG GCCTGGAGAT CGGCGCCGAC GACTACCTGG CCAAGCCGTT TTCCGTGCTG GAGCTGGTGG CGCGCGTCAA GGCGCTGCTG CGCCGCGTGG AGGCGCTGGC CCAGAATGCA AGGCTGGAGT CCGGCAGCCT GACCATCGCC GGCCTGGCCA TGGACCCCGT GGCGCGCGAT GCCCGGCTGC ATGGTGCCCG GCTGGACCTG ACCCCGCGCG AGTTCGACCT GCTGTACTTC TTTGCGCGCC AGCCCGGCAA GGTGTTCTCG CGCATGGACC TGCTCAACGC CGTCTGGGGC TACCAGCACG AAGGCTACGA GCACACCGTC AACACCCACA TCAACCGCCT GCGCGCCAAG ATCGAGGCCG ACCCGGCCCA GCCCGCGCGC ATCCTCACCG TCTGGGGGCG CGGATACAAG TTCGCCGAGG CGGGGGAGGG CGCCTGA
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Protein sequence | MTATRRVLLV EDDAHIADLL TLHLRDEGLE VMHCARGDDG LRQLERGGWD ALVLDIMLPG VDGLEICRRA RAMARYTPII IISARSSEVQ RILGLEIGAD DYLAKPFSVL ELVARVKALL RRVEALAQNA RLESGSLTIA GLAMDPVARD ARLHGARLDL TPREFDLLYF FARQPGKVFS RMDLLNAVWG YQHEGYEHTV NTHINRLRAK IEADPAQPAR ILTVWGRGYK FAEAGEGA
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