| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3065 |
|---|
| Symbol | |
|---|
| ID | 5748649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3376716 |
|---|
| End bp | 3377441 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641298168 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564088 |
|---|
| Protein GI | 160898506 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3382] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.570745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.843466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCA CATCACCTCT CCACTCACAA GGCCTGATCT TGCAGTTCTC CTACTCACCC
TCCATCCCCC GCGACTTTCC TGAACTGGCC TCGCAGACCT TGCTGCTGCG CGGCATGTCA
CCCGACGTGC CCGCACACGC CGTGATCGCA CCCTTCATGG CACAGGCCAG GCAGAACCTG
GCCTGCACCC CGGAAAGCGA GATGCCATCC ATTCAGGCCT GGCGGCGCGG CTTTGCCAGG
ATGGGCCTCA AGCCCACGCA ATACCGCTGC GCCGCCGAGG CCCTGCTGCG CCGCTTGCGC
AAGGAAGGAG ATCTGCCGGG CCTGCATCCG CTGGTGGACC TGTGCAATGC GGCCTCGGTG
GCCTTTGCCA TTCCCGTGGC CGTCTTCGAC CTGGACCGCG TCAGCGGCTG CCTGCAGGTG
CGCCCCGCAA CCGGCAGTGA GGTCTACGAG ACCTTCTCGG GCGAGATCGA ATATCCCGAG
CCCGGCGAAA TCATCTTCGC CGACACCGCT GGCCGCGCCC ACGCCCGGCG CTGGTGCAAC
CGCCAAAGCG GCCACTCGGC AGTGCGCGAA TCCACAGTCA ACGCGCTGAT CGTGACCGAG
GCGCTGCACG CCACGGGCAA GGCGGATACG CGGCAGCTGG TGGAAGCATT GCAATCGGCG
GCCGGGCGGC TGTGGCCCGA GGCCGTTTCA CACCGAAGCA ACCCCTCGCA GGCCGCCCTG
GCCTGA
|
|---|
| Protein sequence | MEITSPLHSQ GLILQFSYSP SIPRDFPELA SQTLLLRGMS PDVPAHAVIA PFMAQARQNL
ACTPESEMPS IQAWRRGFAR MGLKPTQYRC AAEALLRRLR KEGDLPGLHP LVDLCNAASV
AFAIPVAVFD LDRVSGCLQV RPATGSEVYE TFSGEIEYPE PGEIIFADTA GRAHARRWCN
RQSGHSAVRE STVNALIVTE ALHATGKADT RQLVEALQSA AGRLWPEAVS HRSNPSQAAL
A
|
|---|
| |