Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3064 |
Symbol | |
ID | 5748648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3374236 |
End bp | 3376395 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298167 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001564087 |
Protein GI | 160898505 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.981244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCC AAAGACTTTC GCGCACGGCA GTTGCGCATG CCGCCCTGCT TGCCCTGTGC GGCGCAGCCC ACGCCCAGGC CCAGCCTGAA AATGTTCCCG AGGCCACGCT CGCCCCGGTC ACCGTGAACG CAGGCGCCGA GAAGGAAAAT CCCACCGGAG CCGTGGTGGG CTTCACCGCA AAGCGCGCCA TTTCGGCCAC CAAGACCGAC ACGCCGCTGA TCGAGACGCC CCAGGCCATC AGCGTGGTCA CGCGCGACCA GTTCGAGGCG CAGGGCGTGC AGACGCTGCG CCAGACCACG GCCTACAGCG CGGGCGTGGT GTCCAACTAT TTCGACAGCC GGGTGGACAG CTTCTCGGCA CGCGGCGGCA GCGTGAGCCA GTACCAGGAC GGGCTGCTGC GCACCTACGG CACCTACAAC ACCAGCCGCC CCGACCCCTA CACGCTGGAG CGCGTGGAGT TCCTGCGCGG ACCCTCTTCC GTGCTCTACG GCCAGGGCAG CGTGGGCGGC GTGCTCAACC TGACCAGCAA ACGCCCGCAG GCCGAGGCGC TGCGCGAGGT TCAGGTGCAG ATGGGCAGCT ACGGGCGCAA GCAGATCGCC ACCGACCTGA CCGGCGCCGT CACCGAAGAC GGCCAGTGGC TGTACCGCCT GGTGGCCGTG GGCCGGGAAA GCGGCACCCA GGTGGACCAT GTGAACGACG ACCGCCTGGT CATCGCGCCC AGCCTGACCT GGCGGCCCAG CGCCGATACC TCACTCACGC TGCAGGCGCT CTACCAGAAA GACAAGAGCG GCTCGCTGAT CGGCTTCTTC CCCTGGCAGG GCACTCGCCT GCCCAGCCCC TACGGCCAGA TTCCCACCAG CACCTTCATC GGCGAGCCCG GCTGGGACTC GTTCGACACA GAGAACAAAT CCTGGGGCTA CCTGTTCAGC CACCGTCTGA ACGCGGACTG GACCGTGCGC CAGAACCTGC GGCGCACCAT CAGCGACGTG GACTACCGCT CCATATACAC CAGCTTCACC GCCATCCCGG GCCAGGGCCG CCCTGCGCGC CCGGTCTTCA ACCCCGACAA CCGCAGCGTC TACCGCGATG CCTCCTGGCA GGTCAACGGC GGGCGCATGC TGGTGATCGA CACGCAGCTC GAAGGCCGGC TGCGCTGGGG CACGGCCGAG CACACCGTGC TGGCCGGCAT GGATGCGCAG CGCAACAGCA CCAGCCAGTC CACCTGGCGC GGCCTGACCG CGCCGTTTGA CGTCTACAAC CCCGTATACG GCAACTTCAC GCCGCCCACG GCCTCGCAGC TGGTGCGCCA GCCGGGCGTG TCGCAAAAGC AATTGGGCTT CTACGCCCAG GACCAGATCA AGTGGGGCCG CTGGACCGCC ACCCTGGGCC TGCGCCACGA CAGCGCGCAG ACCGATACCG AAGGCCGGCC CGCCTCCGCC GTGGACGAGA AGGCCTGGAC CAAGCGCGCA GGCGCCACCT ACCAGATGGA CGGTGGCTGG GCGCCCTACC TGGGCTACTC CGAGTCCTTC CAGCCGCTGG GCGGCGTGGA TGTCTACGGC ACGCCCTACA AGGCCCAGCG CGGCGAGCAA TGGGAAGCCG GCGTGAAGTG GCAGCCGCCG GGCCAGGGCC TGTCGGCCTT TGCCGCCGTC TACACGCTGC GCGAGAAGAA CCGCAAGACC ACCGACCCGG CCAACCCGCT CAACAGCCTG CAGATCGGCG AGGTCAAGGT CAACGGCTTC GAGGCCGAGC TCACCGCCAG CCTGGCCCGC CACTGGGACG CCACCCTGGC CTATGCGTAC ACCGACGCCG TCATCTCGCG CAGCAATGGC GGCGACCAGG GCCAGCGCGT GACCAGCGTG CCGCGCCACA CGGCGTCGGC CTGGCTAACC CACCGCTTTG CCAGCGAAGG GCGCGGCGGC TGGAGCCTGG GTGCCGGCGT GCGCTATACA GGTTCGCAGT GGACGGGCAC CAGCCTGGTG GACACGCCTT CGGCCACCCT GCTGGACGCC ATGGTGTCCT ATGACGCCGG CCCATGGCGC CTGGCCTTCA ACGTGGTCAA CCTGACCGAC AAGGTGCAGA TCACGCAGTG CCTGGCACGC GGCGACTGCT TCTACGGCCA GCGGCGCACC TTTGCGGTGA CGGGAACGCA CCGCTTCTGA
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Protein sequence | MPIQRLSRTA VAHAALLALC GAAHAQAQPE NVPEATLAPV TVNAGAEKEN PTGAVVGFTA KRAISATKTD TPLIETPQAI SVVTRDQFEA QGVQTLRQTT AYSAGVVSNY FDSRVDSFSA RGGSVSQYQD GLLRTYGTYN TSRPDPYTLE RVEFLRGPSS VLYGQGSVGG VLNLTSKRPQ AEALREVQVQ MGSYGRKQIA TDLTGAVTED GQWLYRLVAV GRESGTQVDH VNDDRLVIAP SLTWRPSADT SLTLQALYQK DKSGSLIGFF PWQGTRLPSP YGQIPTSTFI GEPGWDSFDT ENKSWGYLFS HRLNADWTVR QNLRRTISDV DYRSIYTSFT AIPGQGRPAR PVFNPDNRSV YRDASWQVNG GRMLVIDTQL EGRLRWGTAE HTVLAGMDAQ RNSTSQSTWR GLTAPFDVYN PVYGNFTPPT ASQLVRQPGV SQKQLGFYAQ DQIKWGRWTA TLGLRHDSAQ TDTEGRPASA VDEKAWTKRA GATYQMDGGW APYLGYSESF QPLGGVDVYG TPYKAQRGEQ WEAGVKWQPP GQGLSAFAAV YTLREKNRKT TDPANPLNSL QIGEVKVNGF EAELTASLAR HWDATLAYAY TDAVISRSNG GDQGQRVTSV PRHTASAWLT HRFASEGRGG WSLGAGVRYT GSQWTGTSLV DTPSATLLDA MVSYDAGPWR LAFNVVNLTD KVQITQCLAR GDCFYGQRRT FAVTGTHRF
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