Gene Daci_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3046 
Symbol 
ID5748630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3351826 
End bp3352545 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content73% 
IMG OID641298149 
Productmetallophosphoesterase 
Protein accessionYP_001564069 
Protein GI160898487 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0160441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.430681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCC ACGCACCGTT GCCAAGTCCT GTTTCCCCCG ACGCCCTGGC CGGCAGCCTG 
GGCATCCTTC TGGCGGGCGA GCCCGTCCAC CTGCTGGCCC AGCACGCCCT GTGGTGGCCC
GCCCAGGGCA CGCTGTTCAT TGCCGACCTG CACCTGGGCA AGGCCGCCAC CTTCCGCGCG
CGCGGCATTC CCGTGCCGGC CGGCACCACC CAGGGCAACC TGGACCGGCT GTCGGCGCTG
CTGCAGGGCC TGCCGGTGCG CCGGCTGGTC GTTCTGGGCG ACTTCCTGCA TGCCGCGCAG
GCCCGCACGC CGTCCGTGCT GGCCGCCCTG GCCGACTGGC GACGCCGCCA CGCGGCGCTG
GAAGTGGTCC TGGTGCGTGG CAACCACGAC AGCCATGCGG GCGACCCGCC GTCCGCGCTG
GGCATCAGCG TGGTGGACGA GCCCTGGCGC CTGGGGCCAT TCGCGGGCTG CCATTACCCG
CAGGAGGCTC CTGCCTGCCA TGTGCTGGCC GGCCATGTTC ACCCCGCCGT CGTGCTGCGC
GGCCCCGGGC GCGATGCGCT GCGCCTGCCG TGCTTTGCCG TCCATGCCGG CTTCACCCTG
CTGCCGGCCT TCGGCCTGTT CACTGGCATG GCCAGCCTGC CGCCCGGTCC TGGCCTCCAG
CGCTTTGCCG TAGGCGGCGG GCGGGTCTGG GCCGTTCCCT GTGGAGGGGG CGGGATGTAA
 
Protein sequence
MKGHAPLPSP VSPDALAGSL GILLAGEPVH LLAQHALWWP AQGTLFIADL HLGKAATFRA 
RGIPVPAGTT QGNLDRLSAL LQGLPVRRLV VLGDFLHAAQ ARTPSVLAAL ADWRRRHAAL
EVVLVRGNHD SHAGDPPSAL GISVVDEPWR LGPFAGCHYP QEAPACHVLA GHVHPAVVLR
GPGRDALRLP CFAVHAGFTL LPAFGLFTGM ASLPPGPGLQ RFAVGGGRVW AVPCGGGGM