Gene Daci_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3003 
Symbol 
ID5748587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3307961 
End bp3308377 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content66% 
IMG OID641298106 
Producthypothetical protein 
Protein accessionYP_001564026 
Protein GI160898444 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0100135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TCGGCATGAA ACTTGGTACC TGTGCCTTCA CGGCAGCCCT GACATTGACC 
CTGGCAGGCT GCTATTCCGC GCCTGCGGCC AACGCCTCTG GCCAGACCCC GCCCAGCGCG
GTCAGCGTGC AAAACGGCAT GCTGGTCGGC GCCAACGGCA TGACGCTCTA CACCTTCGAC
AAGGACACGG CCGGCAGCGG CAAGTCCGTC TGCAACGGCC CCTGCGCGAC CAACTGGCCG
CCGCTGATGG GCAAGCAGGC GCCCTCTGGC GGCAACTACA GCGTGATACA GCGGGACGAT
GGCAGCAGCC AGATCGCCTA CAAGGGCAAG CCGCTGTACT ACTGGGTGAA GGACGGCAAG
GCCGGTGACA CCACGGGCGA CGGCGTCATG GGCGTCTGGC ATACCGCACG CCCCTGA
 
Protein sequence
MKKLGMKLGT CAFTAALTLT LAGCYSAPAA NASGQTPPSA VSVQNGMLVG ANGMTLYTFD 
KDTAGSGKSV CNGPCATNWP PLMGKQAPSG GNYSVIQRDD GSSQIAYKGK PLYYWVKDGK
AGDTTGDGVM GVWHTARP