| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2992 |
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| Symbol | truB |
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| ID | 5748576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3296961 |
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| End bp | 3297926 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298095 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001564015 |
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| Protein GI | 160898433 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.10878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CACGCACAAG GGTGCAGCGG CGCCCTGTGC ATGGGGTGTT GCTACTCGAC
AAACCGCTGG AGCTGTCCAG CAACGACGCC TTGCAAAAGG TCAAGTGGTT GCTGCGCGCC
GAAAAGGCCG GACACACCGG CACGCTGGAC CCGTTGGCCA CCGGCGTGCT GCCGCTGTGC
TTCGGTGCGG CGACCAAGTT CAGCCAGTTG CAGCTTGAGG CTGCCAAGAC CTATGAGGCG
ATTGCGCGCC TGGGCCAGAC CACGACCACG GCCGATGCCG AGGGCGAGGT GCTGCGCGAG
CGCGCCGTTG ACCTCGCCGC CCTCACGGCC GAGCGATTGG CCGCCGTGCA GGCGCAGTTC
ACGGGTGCGA TCCGCCAGGT GCCACCCATG TACAGCGCCC TCAAGAAGGA CGGCAAGGCT
CTCTATGAAT ATGCGCGTGC CGGCATCGAA GTCGAGCGCC CGGCGCGCGA AGTGACAATC
CACGCACTGG AGCTTTCGCT GACGCAAGAC AGCGAAGGCT TGCCTGCGAT CCGGATGCTG
GTGACCTGCA GCAAGGGCAC CTATATCCGC ACGCTGGCCG AGGACGTGGG CGAGGCCCTG
GGCTGCGGCG CGCACCTGCG CGCGCTGCGC CGTATCGACA CCGGGGGGCT GGGTGTCGAG
CGCTGTATCT CGCTGGAGGC GCTGGCCGCC ATGGGCGAGG GCGAGCGTCT GCAGCAGTTG
CAGCCTGTCG ACGCCCTGCT GGCCAGCCAC ACGGCTGTCA CGCTGGGCGA GCAAGATGCG
GCCCGTTTTC TCACGGGCCT GCCCCGCAAG GGCGCTTGGG CCGATGCCGA GGCGGTGGCT
GTGTATGGCG AGAACCCACA GGCTCTGCTG GGAGTGGGGC GCGTGGTGCG TGGGGAACTC
ATCCCCGGGC GCCTGCTCAG TTCACTGGAA ATTCAACAGA TTTTGGAAGA CACGCCGCGC
CCATGA
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| Protein sequence | MNAPRTRVQR RPVHGVLLLD KPLELSSNDA LQKVKWLLRA EKAGHTGTLD PLATGVLPLC
FGAATKFSQL QLEAAKTYEA IARLGQTTTT ADAEGEVLRE RAVDLAALTA ERLAAVQAQF
TGAIRQVPPM YSALKKDGKA LYEYARAGIE VERPAREVTI HALELSLTQD SEGLPAIRML
VTCSKGTYIR TLAEDVGEAL GCGAHLRALR RIDTGGLGVE RCISLEALAA MGEGERLQQL
QPVDALLASH TAVTLGEQDA ARFLTGLPRK GAWADAEAVA VYGENPQALL GVGRVVRGEL
IPGRLLSSLE IQQILEDTPR P
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