Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2929 |
Symbol | |
ID | 5748511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3216654 |
End bp | 3218219 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298030 |
Product | ABC transporter related |
Protein accession | YP_001563952 |
Protein GI | 160898370 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.180289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAT CCCCTGTGCA CGGGCCGGAC CGCGGCCCAC CCGCGCCTGC CGCACCGCGC GCGCAACACG CGCCCCATGC CTGCAGCGAC CTGCTGGAGG TGCGTGGGGT GGGCAAGTCG TTTCCGGGCG TCGTGGCGCT GGCCGATGTG CAGCTGCGCC TGCGCAGCGG CAGCGTGCAT GCGCTGATGG GCGAGAACGG TGCCGGCAAA TCCACCCTGA TGAAGATCAT TGCCGGCGTG CATGCGCCCG ACACCGGCGA GATCCGCCTC AGGGGCCGGC CCGTCACGCT GCGCAGCCCG CTGGATGCGC TCAGGCAAGG CATTGCCATG ATCCACCAGG AACTGAACCT CATGCCCACC ATGACGGTGG CCGAGAACAT CTGGATAGGC CGCGAGCCCG TCAACCGCTT GGGCCTGGTC GACCACCGCC AGCTGCGCCA GCGCACCCAG GCCCTGTTCG AGCGGCTGGC CATCGACATG GACCCCGACT CCGAGGTGCG CACGCTGAGC GTGGCCAGCC GCCAGATGGT GGAGATCGCC AAGGCCGTGT CCTTCGACTT CGAGGTGCTG ATCATGGACG AGCCCACCTC CGCGCTCACC GACCGGGAGG TGGAGCACCT GTTTCGCATC ATCGGCCACC TGCGCGGCCA GGGCAAAGGC ATCGTCTACA TCACGCACAA GATGAACGAG CTGTTCGAGA TCGCCGACGA GTTCTCGGTG TTCCGCGACG GCAGGTACAT AGGCACGCAT GCATCGGCCG ATGTCACGCG CGACGACATC ATCCGCATGA TGGTCGGGCG CGAGATCACC CGGATGTTCC CCAAGCAGGA CGTGGCCCTG GGCGATGTGG TGCTCTCGGT GGACGGGCTG GGCGTCGAGG GCGTGTTCCA TGGCCTGCGC TTCGAGCTGC GCGCCGGGGA GATCCTGGGC GTGGCCGGCC TGGTGGGCTC CGGGCGCTCC AATCTTGCCG AGGCGCTGTT CGGCGTCGTG CCCGCCACCT GCGGCGAGAT CCGCATCGGC GGCGAGCCGG TGCGCATCAC CTCGCCTGCC CAGGCCATGC GGCTGGGCAT GGCCTTTCTC ACCGAGGACC GCAAGGACAC GGGCTGCTTC ATGGGCCTGG ACCTGCTGGC CAACATGGAG GTGGCGCTGC TGCACGAGCG CCATGTGCGC TGGGGTCTGG TCGCGCATGC CGCCGTGGCA CGCGAATGCG AGGACATGGC CCGCACGCTG CAGGTCCGGT CCCCCGGGCT GCACGAGGAC ATCCGCAACC TGTCGGGCGG CAACCAGCAA AAGGTGCTGA TCGGCCGCTG GCTGCTGACG CGCCCGCGCA TCCTCATCCT GGACGAGCCG ACGCGCGGCA TCGACGTGGG CGCCAAGGCC GAGATCCATC GCCTCGTGGG CGCGCTCGCG GCCCAGGGAA CTGCCGTGCT GATGGTCTCC TCGGAAATGC CCGAGGTGCT GGGCATGAGC GACCGCATCC TGGTCATGCA TGAGGGGCGC ATGACCGGCA TCGTCGAGCG CAGGGACGCC GACCAGGTGC GGATCATGGA ACTGGCCTCC CGCTGA
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Protein sequence | MSASPVHGPD RGPPAPAAPR AQHAPHACSD LLEVRGVGKS FPGVVALADV QLRLRSGSVH ALMGENGAGK STLMKIIAGV HAPDTGEIRL RGRPVTLRSP LDALRQGIAM IHQELNLMPT MTVAENIWIG REPVNRLGLV DHRQLRQRTQ ALFERLAIDM DPDSEVRTLS VASRQMVEIA KAVSFDFEVL IMDEPTSALT DREVEHLFRI IGHLRGQGKG IVYITHKMNE LFEIADEFSV FRDGRYIGTH ASADVTRDDI IRMMVGREIT RMFPKQDVAL GDVVLSVDGL GVEGVFHGLR FELRAGEILG VAGLVGSGRS NLAEALFGVV PATCGEIRIG GEPVRITSPA QAMRLGMAFL TEDRKDTGCF MGLDLLANME VALLHERHVR WGLVAHAAVA RECEDMARTL QVRSPGLHED IRNLSGGNQQ KVLIGRWLLT RPRILILDEP TRGIDVGAKA EIHRLVGALA AQGTAVLMVS SEMPEVLGMS DRILVMHEGR MTGIVERRDA DQVRIMELAS R
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