| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2921 |
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| Symbol | |
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| ID | 5748503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3206583 |
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| End bp | 3207272 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298022 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001563944 |
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| Protein GI | 160898362 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.190475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCCCA TGAGCCGGGC ATGTGCTTCC AGACGTGTCA GACTCGCGCC CATGTCCGAA
CCCACCCTGC TCGTTGCCGA TGACCACCCG CTGTTCCGCG CCGCGGTGAT CCATGTGCTG
CGCGAGGCCC TGCCGCAGTT CGCCGTGCTG GAAGCCGCAA GCGCCGCCAC GCTGGGCGCG
GCGCTGCAGC AGCACCCCGA GATCGAGCTG GTGCTGCTGG ACCTGGCCAT GCCGGGGGCG
CGCGGCTTTT CGGCGCTGCT GCATGTGCGC GGCGAGTACC CCGACGTTCC GGTGGTGGTG
ATTTCTTCCA ATGACCACCC GCGCGTGATC CGCCGTGCGC AGCAGTTCGG TGCCGCGGGC
TTCATTCCGA AATCGGCGCC GGCCGAGGCC ATTGGCACGG CCCTGCAGGA AGTGCTGGAC
GGCGGCAGCT GGTTCCCGCC CATGGCCGCC GAGCGCTCCG AGGCCGACGC CGCGCTGGCC
GCGCGGCTGG CCCAGCTCAC GCCCCAGCAG TTCCGCGTGC TGCTGTGCCT GGCCGACGGC
CTGCTCAACA AACAGATCGC CCACGAGCTG GGGCTGGCCG AGAACACCGT CAAGGTGCAT
GTGACGGCCA TTCTCAAGAA GCTGGAGTGC TACAGCCGCA CGCAGGCGGC CGTGCTGGTC
AAGAGCCTGG AGAACGACGG CACGGTCTGA
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| Protein sequence | MDPMSRACAS RRVRLAPMSE PTLLVADDHP LFRAAVIHVL REALPQFAVL EAASAATLGA
ALQQHPEIEL VLLDLAMPGA RGFSALLHVR GEYPDVPVVV ISSNDHPRVI RRAQQFGAAG
FIPKSAPAEA IGTALQEVLD GGSWFPPMAA ERSEADAALA ARLAQLTPQQ FRVLLCLADG
LLNKQIAHEL GLAENTVKVH VTAILKKLEC YSRTQAAVLV KSLENDGTV
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