Gene Daci_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2909 
Symbol 
ID5748491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3194505 
End bp3194996 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID641298010 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001563932 
Protein GI160898350 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.272302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0133564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT TTGCCCTCCT CCTCGCCACC GCACTGCTCG CCGGCCCCGC TGCCGTCTTC 
GCCCATGGCA GCGAAGCCCA CGATGACGCT CCCAAGACCG CCGCAGTCAA GGAGCAAAAG
CCCTGGGGCA TTGCCGGCGA TGCCTCGGCC GCCCGGCGCA CCATCACCCT GGACATGAGC
GACAACATGC GCTTCACGCC CGAGCGCATC AGCGTCAAGC GCGGCGAAAC CGTGCGCCTG
CGCGTGGCCA ACAAGGGCCA GGTCATGCAC GAGATCGTGC TGGGCACGCC GGCCTCGCTG
GACGAGCACG CGCAGATGAT GCTCAAGTTC CCCACCATGG AGCACGGCGA GCCCTACATG
GCCCATGTCT CGCCCGGCAA ATCCGGCGAC CTGGTCTGGA ATTTCAACCG CGAAGGCAGC
TTCGACTTTG CCTGCCTCAT CCCCGGCCAC TACCAGGCCG GCATGCGCGG AACCATCACG
GTGACGCAAT GA
 
Protein sequence
MNTFALLLAT ALLAGPAAVF AHGSEAHDDA PKTAAVKEQK PWGIAGDASA ARRTITLDMS 
DNMRFTPERI SVKRGETVRL RVANKGQVMH EIVLGTPASL DEHAQMMLKF PTMEHGEPYM
AHVSPGKSGD LVWNFNREGS FDFACLIPGH YQAGMRGTIT VTQ