| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2829 |
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| Symbol | |
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| ID | 5748405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3105642 |
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| End bp | 3106838 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297924 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001563852 |
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| Protein GI | 160898270 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.286553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.182864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCG CCGACCGTCT GAACAACGTA GAAACCTCCG CCATCCGCGA GCTGTTCAAG
CTGCTGGGCA AGCCCGGCAT CATCAGCTTT GCGGGTGGTT TCCCGGACAG CGCCATGTTC
GACGTGGCCG GCATCAGCGC CGCCTCCCAG GCCGCGCTGC AGCAGGAACC GGGCGCCGCG
CTGCAGTACG GTGCGACCGA GGGCTACCAG CCGCTGCGCG AGCAGATCGC AGCCTTCATG
GCCGCCAAGG GCGTGCGCGA GCTGGCCCCC GAGCAACTGG TGGTGACCAC GGGCAGCCAG
CAGGCGCTGG ACCTGCTGGG CAAGACCATG ATCAACCCCG GCGACAAGGT CATCGTCGAA
GGCCCGACCT TCCTGGCCAC CATCCAGTGC TTCCGCCTGT ACGGCGCCGA AGTCATCAGC
GCGCCCATCG ATGCCGAAGG CGCCCAGGTC GATGCGCTGG AGCAACTCAT TGCCGAGCAC
CGCCCCAAGC TGGTCTACCT GATCCCCACC TTCGGCAACC CCAGCGGCGC CATGCTGAGC
CTGGAACGCC GCAAAAAGGT GCTGGAGCTG GCCGTCAAGT ACCAGACCCT GGTGGTGGAA
GACGATCCCT ACGGCGACCT GTATTTTGGC GAAGCGCCTC CGCCCAGCCT GCTGGCGCTG
TCCAGCCAGG TGCCCGGCAG CCGCGACTGG CTGGCGCACT GCGGCTCGCT GAGCAAGGTG
CTCAGCCCCG GCCTGCGCAT TGGCTGGCTG GTGGCCCCGG CCGAGCTGCT GGGCCGCGCC
GTGATGTGCA AGCAGTTCAG CGATGCCCAC ACCAGCACCT TTGCCCAGGC CACGGCCGCG
CAGTACCTGA AGTCCGGCGC CATGCCCGCC ACGCTGGCCC ATGTGCGCGA GGTCTACGCG
CGCCGCGCCA AGGCCATGGG CGATGCGCTG CGCGAGCACC TCGGCGATGC CGTGGAATTC
CTGCAGCCCC AGGGCGGCCT GTTCCTGTGG GTGCGCCTGA CCGGCAAGGG CGGCGCGCTG
GCCGATGCCG GTGAGTTGGC CAAGCGGGCC ATTGCCCAGG GCGTGGCCTT TGTGCCGGGT
GCGCCGTTCT TTGCGCAAAA CCCCGATGCC ACCAGCTTCC GCCTCTCGTT CGCCACGGCT
GACGAGGACA AGATCCGCGA AGGCATCGCC CGCCTGGCCC AGGCGCTCAA GGCATGA
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| Protein sequence | MQFADRLNNV ETSAIRELFK LLGKPGIISF AGGFPDSAMF DVAGISAASQ AALQQEPGAA
LQYGATEGYQ PLREQIAAFM AAKGVRELAP EQLVVTTGSQ QALDLLGKTM INPGDKVIVE
GPTFLATIQC FRLYGAEVIS APIDAEGAQV DALEQLIAEH RPKLVYLIPT FGNPSGAMLS
LERRKKVLEL AVKYQTLVVE DDPYGDLYFG EAPPPSLLAL SSQVPGSRDW LAHCGSLSKV
LSPGLRIGWL VAPAELLGRA VMCKQFSDAH TSTFAQATAA QYLKSGAMPA TLAHVREVYA
RRAKAMGDAL REHLGDAVEF LQPQGGLFLW VRLTGKGGAL ADAGELAKRA IAQGVAFVPG
APFFAQNPDA TSFRLSFATA DEDKIREGIA RLAQALKA
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