| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2815 |
|---|
| Symbol | |
|---|
| ID | 5748391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3090871 |
|---|
| End bp | 3091665 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297910 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001563838 |
|---|
| Protein GI | 160898256 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.336695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.311573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCCCC AGCCCCCCAC TCCCTCCATG ACGGTTTCCT TCTCGGCCAT CCAGCCCGGT
CTCAAGCTTG CGGACCAGGT TGCCCGGCAG TTGGAGGCGC GCATCCGCGC CGGCAATCTG
CAGCCGGGGC AGAAGCTGCC GACCGAGGCC GAACTCGTGC AGCAGCTCGA GGTCAGCCGC
ACCGTGGTGC GCGAGGCGGT GTCCCAGCTC AAGTCGCGCA ACCTGGTGGA ATCGCGCCAG
GGCAGCGGCG TGTTCGTGAA GGCGGCAGGC ATAGAGCCAC TGGACTTCGA AGGCCTGCCG
GCGGCTGGCA GGAATGCGCT GATCCAGATC ACCGAGGTGC GCCGCGCACT GGAGGCCGAG
GTGGCCGAAC TCGCGGCGCG CCGGCGCAGC GAAGAGGACA TGCAGCGCAT CCACGATGCG
GAGAGCGCCC TGGCCGAGGC CGTGCGGCTG GGCCGTGATG GCGTGGAGGA GGACATGGCG
TTTCACCGCG CCATTGCCCA GGCTTCGGGC AACCCGTTCC TGATCAGCAC GCTGGACTAC
CTGTCGCAGT TCCTGCGCGG CGCCATGCGC ATCACGCGCG CCAACGAGGC GCGGCGCGAG
GACTTCGGCA AGGCCGTGGA ACGCGAGCAC CACAGCATCG TGCTGGCCAT CGAGGCCGGC
GACCCCAAGG CCGCGCGCAA GGCCGCCGCC ACGCACATGG GCAACGCCAT AGACCGCATC
CACCGCGCCG ACGCCAGCTT CTGGGAGCAG GACGGCGAAC GCCTGGCCCG CGACATCCTG
GCCGCCAAGC CCTGA
|
|---|
| Protein sequence | MSPQPPTPSM TVSFSAIQPG LKLADQVARQ LEARIRAGNL QPGQKLPTEA ELVQQLEVSR
TVVREAVSQL KSRNLVESRQ GSGVFVKAAG IEPLDFEGLP AAGRNALIQI TEVRRALEAE
VAELAARRRS EEDMQRIHDA ESALAEAVRL GRDGVEEDMA FHRAIAQASG NPFLISTLDY
LSQFLRGAMR ITRANEARRE DFGKAVEREH HSIVLAIEAG DPKAARKAAA THMGNAIDRI
HRADASFWEQ DGERLARDIL AAKP
|
|---|
| |