Gene Daci_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2787 
Symbol 
ID5748363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3065693 
End bp3066511 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID641297882 
Producthypothetical protein 
Protein accessionYP_001563810 
Protein GI160898228 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.770752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.86011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACC TGCTGTTTCT CGAACTGGCC CTGCTGGGCC TGTGCTCCGG TTTCCTGGCC 
GGCCTGCTGG GAGTGGGCGG CGGCATGGTG CTCGTGCCGT TTCTGACCTA CTTCCTCGAC
AAGCGCGGGG TCGGCCCGGA TCTGTCCGTG AAGATGGCGA TTGCCACGGC CATGGCCACC
ATCGTGTTCA CCTCGATCTC CAGCCTGCGC GCCCACCACG GTCGTGGCGC CGTGCGCTGG
GACATCGTGC GCAGCCTGGC GCCGGGCATC ATCACGGGCG GCCTGCTCGC CAGCCTGGGC
GTTTTCGCGC TGCTGCGCGG CAAGTACCTA GCGTTGTTCT TTGGCGTATT CATCGGCTAC
ATGGCGCTTC GCATGCTGCG CAGCAACAGC CAGCCCACGG CCACGCGCGC CCTGCCCGGC
CCGCTGGGGC TGTACGGCGC GGGTACGGGC CTAGGCTTCA TCTCGGGACT GGTGGGTGCG
GGCGGGGCCT TCATCAGCGT GCCCTTCATG ATGCGCTGCT CGGTGCCCAT GCACATGGCC
GTGGGCACCA GCGCGGCGCT GGGGTTTCCG ATTGCCGTGG TGAATGCGGC GGGCCTGATC
TTCACCGGCG CGGGCGACGC GGGGCGCCCC GAATACTCGC TGGGCTACCT GTGGCTGCCG
GCCCTGCTGG CCCTGGCCTG CTGCAGCGTG CTGACGGCAC CGCTGGGGGC ACGGGCCGCG
CACCGGCTGC CCGTGGGCCA GCTCAAGCGC ATCTTTGCCA CGCTGCTGTT CGGCCTGGCG
GCCTACATGC TCTGGAAGGG CTTGAGCGCA GGCAGCTGA
 
Protein sequence
MPDLLFLELA LLGLCSGFLA GLLGVGGGMV LVPFLTYFLD KRGVGPDLSV KMAIATAMAT 
IVFTSISSLR AHHGRGAVRW DIVRSLAPGI ITGGLLASLG VFALLRGKYL ALFFGVFIGY
MALRMLRSNS QPTATRALPG PLGLYGAGTG LGFISGLVGA GGAFISVPFM MRCSVPMHMA
VGTSAALGFP IAVVNAAGLI FTGAGDAGRP EYSLGYLWLP ALLALACCSV LTAPLGARAA
HRLPVGQLKR IFATLLFGLA AYMLWKGLSA GS