| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2783 |
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| Symbol | |
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| ID | 5748359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3059726 |
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| End bp | 3061108 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297878 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001563806 |
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| Protein GI | 160898224 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.682554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.601804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG TCACCCCAGA GCTGCTGCGT CGCTTTGACG TACCGGGGCC CCGATACACT
TCGTTCCCTA CCGCCGACCG CTTTGTCGAG GCCTTTGGTG CAGAGGACTA TATCCTGGCG
CTGCAACAAC GCAAATCGAG TACCGCAGCG CGTGCCACGC CTTTGTCGCT GTATGTGCAC
GTGCCTTTTT GCGAGTCGCT TTGCTACTAC TGCGCCTGCA ACAAGATCGT GACGCGCCAC
CACGATCGCG CCGCCGTCTA CCTGGACTAC CTGGCGCGCG AGATGGCCTT GCATACGGCC
CATTGCGGCA AGGGCCAGAC CGTCAGCCAG CTGCACCTGG GCGGCGGCAC GCCCACCTTC
TTCTCCGACG ACGAGCTGCG CACGCTGATG GGCCTGTTGC GCGAGCATTT CAAGCTGGAG
CCGGGTGGCG AGTACTCCAT CGAGGTCGAT CCGCGCACTG TCAGCGTCGA GCGCCTGGCC
GTGCTCAAGG AGCTGGGCTT CAACCGTCTG AGCTTCGGCG TGCAGGACTT CGACGAGCAG
GTGCAGATCG CGGTGCACCG CGTGCAGCCG GCCGAGCAGG TGTTCGAGCT GGTGGCGGCC
GCGCGGCAGC TGGGCTTTGC CTCCATCAAC GTGGACCTGA TCTACGGCCT GCCCAAGCAG
ACGCCCGAAT CCTTCGAGCG CACGCTGGCC CAGGTCAACG CGCTGCGGCC CGACCGCATC
GCGCTCTATG CCTATGCCCA CCTGCCTGAG CGCTTCAAGC CGCAGCGGCG CATTGCGGCC
GAGGACCTGC CCCAGGGGGC CGACAAGCTG GCCATGCTGT CGCGTTCCAT CGCCGCGTTC
ATGGACGGTG GCTATGTCTA CGTGGGCATG GACCACTTCG CCCTGCCCGA GGACTCGCTG
GCCGTGGCCA AGCGCCAGGG CCGGCTGCAC CGCAATTTCC AGGGCTACAG CACCCAGCCC
GACTGCGACC TGATTGCGCT GGGCGTGTCG GCCATCGGCA AGGTGGGTGC CAGCTACAGC
CAGAACGCCA AGACGCTGGA GGAGTACTAC GACGCCATCG ACGCCAGCCA CCTGCCCGTG
GTGCGGGGCC TGGCGCTGTC GCGCGACGAC CTGGTGCGCC GCGCCGTCAT CATGGCCATC
ATGTGCCAGG GCGCCGTGCT GTTCGAGCCC ATGGAGCAGG CCTGGCTGCT GGGCTTTCGC
GAGTACTTCG CGCCCGAGAT GGCGGCCCTG GAGGACCTGC AGGCCAAGGG CCTGGTGCAG
ATCAGCGACG AGGGCTTCCA GGTCACGCCC ATGGGCTGGT ACTTCGTGCG CGGCGTGGCC
ATGCTGTTTG ACCGATATCT GCAGGCGGAC AAGAACCGGG CGCGGTTTTC GAGGATCATC
TAG
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| Protein sequence | MTAVTPELLR RFDVPGPRYT SFPTADRFVE AFGAEDYILA LQQRKSSTAA RATPLSLYVH
VPFCESLCYY CACNKIVTRH HDRAAVYLDY LAREMALHTA HCGKGQTVSQ LHLGGGTPTF
FSDDELRTLM GLLREHFKLE PGGEYSIEVD PRTVSVERLA VLKELGFNRL SFGVQDFDEQ
VQIAVHRVQP AEQVFELVAA ARQLGFASIN VDLIYGLPKQ TPESFERTLA QVNALRPDRI
ALYAYAHLPE RFKPQRRIAA EDLPQGADKL AMLSRSIAAF MDGGYVYVGM DHFALPEDSL
AVAKRQGRLH RNFQGYSTQP DCDLIALGVS AIGKVGASYS QNAKTLEEYY DAIDASHLPV
VRGLALSRDD LVRRAVIMAI MCQGAVLFEP MEQAWLLGFR EYFAPEMAAL EDLQAKGLVQ
ISDEGFQVTP MGWYFVRGVA MLFDRYLQAD KNRARFSRII
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