Gene Daci_2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2733 
Symbol 
ID5748309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3002354 
End bp3004420 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content68% 
IMG OID641297828 
Productnuclease 
Protein accessionYP_001563756 
Protein GI160898174 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.905416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG TTACTTACAC CGAAGCTCAA GCCCTCGACA GCCGCGCAAA CGTGCTGCAA 
GCCGCCGACC CGAGCAAGCA CATGATTCTG GTTCCGCTGT CGCGGCTGGT GCTGCGCCCC
ACGGGCCGCA ACGTGCGCAA GACCGTCCCG CGCATGTCCA TCCCCGAGCT GGCCGCGAGC
ATTCAGCGCG TGGGCCTGCT GCAAAACCTG ATCGTGATTC CCGCCGCCGA TGACCTGCAT
TACGAGGTGG TGGCAGGTGG CCGACGCTTT GCGGCCCTCA AGCTGCTGGC AAAGAAGCAC
CGTATCGCCA AGGATTGGGA CGTGCCTTGC CTGCAGGTGG CCGATGGCAC GGCCCGCACC
GCCAGCCTGA CCGAGAACGT GCAGCGCGAA GCCATGCACC CAGCAGACCA GTTTGAAGCC
TTCGCCGCGC TGGTGGCCGA AGGCCGACCG ATTGAGGACA TTGCGGCGGA TTTCTCCGTT
ACGCCGCTGG TGGTGCAGCG CCGCTTGAAG CTCGCCAATG TCTCGCCGCG TTTGATGGAG
GACTACCGGG CCGATGCCGT GAGCCTCGAT CAGCTGATGG CGCTCTCCAT CACCGACGAC
CACGCCGCGC AGGAATGCGC GTTCTACGAT GCGCCGCAAT GGCAGCGCCA ACCCTCGCAC
TTGCGCGAAC GTCTGACGGA GCGCGAGATT GACGCCTACC GGCATCCGCT GGTGCGCTTC
GTCGGGCTGG ACACCTACGA GCAGGCGGGC GGCGGCATCC GCCGCGACCT GTTCGCGGAG
GGCGATGCAG GCGTGTACCT GACCGACGCC GCGCTGCTGG AACGACTGGC GCAAGACAAG
CTGGCGGGCA TCGCCGCAGA GGTGAAGGCC GAGGGCTGGG CTTGGGCTGA TGCCACGCCG
GGCGTGACCC ATGCCGATCT GCACGCCTTC CAGCGTGCGC CGAGGGAGCG CCGCGAGCCG
AACAAGCGCG AAGCACAGCG CATCGAGAGG CTGCAAGCCA AGATGCAGGA GGTGGCCGAA
GCCATTGATG CCGCGACGGA CGCCGACGAC GAGGACAAGG CCGATGCGCT GCAAGAGGAA
GGCGAGCGGC TGGGCGAGCA GTTGCAGGCG CTGGAAGACG GCTTGCAGGG GTACGGCGCG
AACGTGAAGG CCGCAGCCGG GGCCATCGTC ACCATCGGCC GCAACGGCGA GGTGGTGATT
CATCGCGGAC TGCTGCGCGA GGCCGAGGCC AAGGCACTGC GCACACTGGA GAAGCTGCGC
CAAGGGTTCA GCGACCCAGA TGCCGCGAAC GATGACGAAG GCGAGGACGA CGAGCCGCCC
AAGGCAGCAG CGATTTCCGA CCGACTGGCC CAGCGCCTGA GCGCCCATCG CACCGCCGCG
CTGCAAATCG AGGTGGCCCG GCATCCGCAG GTGGCGGTGG CCGCGCTGGT GCATGGCATG
GTGCAGACCG TCTTGCAGGG CCGCTACTAC GGGCGCGACC TGCCGCTGGG CGTGAGCCTG
AAAGTCCAAG ACCGGCTGGA CGGCATGGCC CCGGACTGGC CCGAGTCACC CGCCGCTGTG
GCGCTGCGTG AATTGCAGCA GGCGTGGAGC GGCAAGCTGC CCGAGGACAG CGCCGAACTG
TTTGCCGCGC TGCTGGCGAT GGAGCAAGGC GAACTGGTCA AGCTGCTGGC CGTGTGCGTG
GCTTCCACGG TGGACGTGGT GACGCCTCGC GCCACACCGC ACCAGCCCGG CGAGGAACTG
GCGCAGGCCG TGGGCCTCGA CATGGCCGCA TGGTGGCAGC CGACCGCCGA GGGGTATTTC
AAGCACGTTC CGAAGGCGGC AGTTCTGCAA GCCGTGGGCG AGTACGCGCC CGATCAGGTT
TCCCGGCTGG CGAAGCTGAA GAAGGCCGAC ATTGCCAGCG AAGCCGAGCG GCTGGCCGAT
GGCGCGGGTT GGATGCCTGC CATCTTTAAG GTCGAAGGCC CGCAGCAGGC AGTGAAGGAA
AGCGCGCAGG AGGCAGGCCC GGAGCAGGAC GCCCCGGAGG ATGCCGAGGC AATGGCGGAT
GAACCCGCCG AGGCGCTGGC CGCTTGA
 
Protein sequence
MNAVTYTEAQ ALDSRANVLQ AADPSKHMIL VPLSRLVLRP TGRNVRKTVP RMSIPELAAS 
IQRVGLLQNL IVIPAADDLH YEVVAGGRRF AALKLLAKKH RIAKDWDVPC LQVADGTART
ASLTENVQRE AMHPADQFEA FAALVAEGRP IEDIAADFSV TPLVVQRRLK LANVSPRLME
DYRADAVSLD QLMALSITDD HAAQECAFYD APQWQRQPSH LRERLTEREI DAYRHPLVRF
VGLDTYEQAG GGIRRDLFAE GDAGVYLTDA ALLERLAQDK LAGIAAEVKA EGWAWADATP
GVTHADLHAF QRAPRERREP NKREAQRIER LQAKMQEVAE AIDAATDADD EDKADALQEE
GERLGEQLQA LEDGLQGYGA NVKAAAGAIV TIGRNGEVVI HRGLLREAEA KALRTLEKLR
QGFSDPDAAN DDEGEDDEPP KAAAISDRLA QRLSAHRTAA LQIEVARHPQ VAVAALVHGM
VQTVLQGRYY GRDLPLGVSL KVQDRLDGMA PDWPESPAAV ALRELQQAWS GKLPEDSAEL
FAALLAMEQG ELVKLLAVCV ASTVDVVTPR ATPHQPGEEL AQAVGLDMAA WWQPTAEGYF
KHVPKAAVLQ AVGEYAPDQV SRLAKLKKAD IASEAERLAD GAGWMPAIFK VEGPQQAVKE
SAQEAGPEQD APEDAEAMAD EPAEALAA