| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2699 |
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| Symbol | |
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| ID | 5748275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2967619 |
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| End bp | 2968653 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297794 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_001563722 |
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| Protein GI | 160898140 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.183128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGCCTTCGTC CTTCGCCACC TCGCTCGACC GCCGCATTCA GATGCTGCGC
ACGGCGATGG GGCCGCTGAT CGCCGCCGCG CTCGAAGACC CGGACGTGGT GGAAGTCATG
CTCAATCCTG ATCGCACCCT TTGGGTGGAT CGGCTTTCAT CGGGCCGCGC ACCGATGGGC
GTGGAGCTGT CCGAGGCGGA CGGCGAGCGA ATCATCCGCC TTGTCGCCGC CCACGTTGGC
GCAGAAGTCC ATCGCGGCCA GCCGCTACTG TCCGCCGAAC TGCCCGAAAC CGGCGAACGC
TTCGAGGGTA TCTTGCCGCC CGCCGCGCCA GGGCCGGCCT TCGCGCTGCG GAAGCGCGCC
ATCGGTGTGA TTCCGCTGGA GCGGTACGTC ATCGACGGGA TGATGACCAG CGCGCAGGCG
GGCTTTCTCG TTCGTGCCGT GCGCGAGCGG CAGAACGTCC TGATCGCCGG CGCCACCAGC
AGCGGCAAGA CCACGCTCGC CAATGCGCTG CTGGCCGAGA TCGCCGCCAC GGGCGACCGC
GTGCTGGTGC TCGAAGACAC GGTGGAACTG CAATGCGCGG CCCGCGACCA CGTTCCGCTG
CGCACCCGCG CAGGCGTGGT GTCGATGACC GAGCTTGTGC GCTCGTCCAT GCGCTTGCGG
CCGGATCGCG TGGTCGTCGG CGAGGTGCGC GGCGCCGAGG CGCTGGATCT CATCAAGGTG
TGGGGCACGG GCCATCCGGG CGGCATCGCC ACGATCCACG CTGGTTCCGC GCTGGGCGCG
CTGCTGCGCC TAGAGCAACT GATTCTCGAA GTGGCGGTGA ACCCGCCCCG TGCGCTGATC
GCGGAAGCGG TCAACGTGGT CATCCACATC GCCGGGCGCG GGCGCAAGCG CCGCATCGAG
AGCATCGCCC GCGTCGTCGG CTTCGATGGC GTGGGCTACC ACCTGGCGGA TGCGCTGGAG
GCTCCATTCC CGGAGCTGCT GCCGCAGTCC GACTTTTCCT CCCTGTCCCC TGACCACTCT
GGAGAACTGC CATGA
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| Protein sequence | MSAAPSSFAT SLDRRIQMLR TAMGPLIAAA LEDPDVVEVM LNPDRTLWVD RLSSGRAPMG
VELSEADGER IIRLVAAHVG AEVHRGQPLL SAELPETGER FEGILPPAAP GPAFALRKRA
IGVIPLERYV IDGMMTSAQA GFLVRAVRER QNVLIAGATS SGKTTLANAL LAEIAATGDR
VLVLEDTVEL QCAARDHVPL RTRAGVVSMT ELVRSSMRLR PDRVVVGEVR GAEALDLIKV
WGTGHPGGIA TIHAGSALGA LLRLEQLILE VAVNPPRALI AEAVNVVIHI AGRGRKRRIE
SIARVVGFDG VGYHLADALE APFPELLPQS DFSSLSPDHS GELP
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