| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2677 |
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| Symbol | |
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| ID | 5748253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2946783 |
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| End bp | 2947643 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641297772 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001563700 |
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| Protein GI | 160898118 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.519308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGCCT TTGATGCGAC GGCAAGGGCC GGAAGCATGA CTGCTGCTGC GAAGCTGCTT
GATCTACAGC AGCCCACCAT CTCAGCGCAT ATTCAGCGCC TGGAGAATGA GTACGGCGTG
GAGCTTTTTC TTCGTCAAGG CCGCCGGCTT GAGCTGACTA CCTTTGGCAG GACTCTGCTG
GACTACACGC GGCGGGCATT CAGCGGCGAG GAAGATGCGC ACGCCCTTTT GGCAGCAGCC
AAAAACCGAT TCGTCGGGCG TCTTGTGATT CACGCGATCG GCCCGTACAA CGTAGTCCCT
GTTCTGAAGG CCTTCGGGAG CCGCCATCCC CAGGTCGAGG TCTCTGTCCG TGTAGGCGAC
TCCCGCTCAA TCACGGAAAA GCTCCTCGAC TACCAGGGTG ATGTCGGCGT GGTCCTCAAT
CACGCCGAGC ACCCCGAACT CCATTGCATG CCATACAGGT CACAGCGCCT GGTGGTCTTT
GCGAACCGAG AGCACGCCCT AGCCCGGTGC GGTGAGATAG TGCTCAAGGA CCTTCAGAGC
CAGCGCTTCG TCATACGTGA GGAAGGTTCA ACGACAAGAA GAGTCTTCGA GAGCGAGCTA
ATTGCCCGCA ATATCAACAT CCAGGTTGCG CTGGAGATGG GAAGCCGGGA GGCTGTCCGC
GAGGCAGTCG CACAAGGAAT AGGACTAGGC GTCGTTGCCG AGACAGCCTA TGTTCCAGAT
CCGCGTCTTG TGAAGCTGAA GATTCTGGAT ACAGCAATGG CCACCCACGT CGACTTCATC
TGTCGTCGCG AACGACAGAA CGCTCCGCTG ATAGCAACGA TTTTCGACTT GGCAAAAGAG
GTGAGAAGAG GCCTGGCCTA A
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| Protein sequence | MKAFDATARA GSMTAAAKLL DLQQPTISAH IQRLENEYGV ELFLRQGRRL ELTTFGRTLL
DYTRRAFSGE EDAHALLAAA KNRFVGRLVI HAIGPYNVVP VLKAFGSRHP QVEVSVRVGD
SRSITEKLLD YQGDVGVVLN HAEHPELHCM PYRSQRLVVF ANREHALARC GEIVLKDLQS
QRFVIREEGS TTRRVFESEL IARNINIQVA LEMGSREAVR EAVAQGIGLG VVAETAYVPD
PRLVKLKILD TAMATHVDFI CRRERQNAPL IATIFDLAKE VRRGLA
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