Gene Daci_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2611 
Symbol 
ID5748181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2880318 
End bp2880725 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID641297700 
ProductXRE family transcriptional regulator 
Protein accessionYP_001563634 
Protein GI160898052 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0796411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000114 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCACC TGTTGCAACT GCCCGATCAG CTTGCGCTGC ACCTGAAGTC GCTGCGCAAG 
GCCGCTGGCG TGAGCCAGGC CCAACTGGCA CAGCGGCTGG GCGTGTCCCA GTCGCGTGTG
GCGGCGATAG AGCGTGACCC GGCCGCCATC AGCGTGCGCC AGCTGATGGA GATCCTGCAG
CTGCTGGATG CCGATCTGCT CATGCGGCCC AGGGCGGATG CGGTGGCTTC TCCTGCGTCT
GCACCTATGT CTGTGCCTGC GCCTGCTGCG TTGAGGGTGG CCGAGCCAGC TCCACAACCG
TACGCGGGTG ACAACGTGCC CCGCAAGCCC GCCGACCGCC CCGTGGCCTT CAAGCCGCAG
GCGCTGCCGC CGCACTGGCA GGACCGCAAG CCGAAAGGGT CCTGGTGA
 
Protein sequence
MDHLLQLPDQ LALHLKSLRK AAGVSQAQLA QRLGVSQSRV AAIERDPAAI SVRQLMEILQ 
LLDADLLMRP RADAVASPAS APMSVPAPAA LRVAEPAPQP YAGDNVPRKP ADRPVAFKPQ
ALPPHWQDRK PKGSW