Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2568 |
Symbol | |
ID | 5748137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2841528 |
End bp | 2841926 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641297656 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001563591 |
Protein GI | 160898009 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.136392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAG CCTATGCACC CAAGAACCCC GCCCTCTTCG ACCAGGGCCT GTCCACCCGC CGCGAGGTGC TGGGCGCCGA GTATGTCGAT GCGTCCATCC AGAACGCCAC GGACTTCAAC ATCGACATGC AGGAGCTGGT CACCCAGTAC TGCTGGGGCG ATGTCTGGAA CCGCCCGGGC CTGGACCGCA GGACGCGCTC CTTCCTGAAC CTGGCCATGA TCACGGCGCT CAACCGCCCG CATGAACTCA AGCTGCATGT GCGCGGCGCC ATCAACAACG GCCTGACCAA GGAAGAGGTC AAGGAGGTCT TCCTGCAGAC CGCCATCTAC TGCGGCGTGC CGGCCGCCAT CGACTCCTTC CGCGTGGCTT CGGAAGTCTT CAAAGAGATG GACATCTGA
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Protein sequence | MTRAYAPKNP ALFDQGLSTR REVLGAEYVD ASIQNATDFN IDMQELVTQY CWGDVWNRPG LDRRTRSFLN LAMITALNRP HELKLHVRGA INNGLTKEEV KEVFLQTAIY CGVPAAIDSF RVASEVFKEM DI
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