Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2544 |
Symbol | |
ID | 5748113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2817150 |
End bp | 2818253 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641297632 |
Product | porin |
Protein accession | YP_001563567 |
Protein GI | 160897985 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.644529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC CCAGCCCTAT CACCCTCGCC ACACCCATGA ACACCAAAAC CCTGGTGCTG ATCACCCTCG CTGCCGCACC GCTGTCGGCC CTTGCGCAAT CCAGCATCAC GCTCTACGGC ATTGCCGATA CCGGCGTGCG CTACACCAGC GGCCTCACCG CCGCCAACGC GGCCAGCAAC ACCTCGGGCG CCGCGCTGTC CAGCGGCGTC AACACCACCA GCCGCTTCGG GTTTCGCGGC CGCGAAGACC TGGGCGGCGG CATGTACGCC CTGTTCAACC TGGAAACCGG CCTGAACCTG GACACCGGCA CCACCGCCAA CTCCAGCAAA TTCTTCGACC GCGCGGCCAT CGTGGGCCTG GGCGGCAACT GGGGCCAGGT CACGGCCGGC CGCCAGACCA ACCTGCTGGC AGATGCCATC AGCCCTGTGG ACCCCGTGGG AATGCGCTTC GCCGCCTTCA ACCCCAACAT CGCCACCGCC GCGCTCAGCA GCCACGGCCT GGGCGTGGAA TACGGCAGCG CGGGCGCCAC CACGGGCTCC TACCGGCTGG ACAACTCGGT CAAGTACACC GGCCGCCTCG GCGGCCTCAC CGCCCGCGCC ATGTACAGCT TTGGCGAGAC GGCGCAAGGC GGCTCCGCCC GCTCATCGGC CGGCGCGGGC CTGGCCTATG GCACGAAGAC ATGGACCGTC TCCGGCGCCT ACCAGCGCTT CAAGACCGCA GACCAATGGG AACTGAAAGC CGCTACCCTG GGCGCCAGCT ACAAATGGGA CAACCTGCGC CTTGCGCTGA ACACCGCGCG CAGCGACGGC CAGACCAACG CCACCACCGC CCGCACCGTG CAGCGCGTGC ACTCGCTGGG CGCCACCTGG TCCGCCCGCA GCACGCTGGA CCTGACCGCC GCCCTGTACC GCGTGGAACG CGAACGCAGC GGCCGCGCCG CAGACGGCTA CACCCGCGCC CTGCTGTTTG CGGAATACAA GCTGTCACGC CGCAGCAAGC TGTATGCGGA GTTGGACCGC ACGCATTGGA GTGGAGGGTT TCAGGGCGGG CAGAACAAGG ATGTGGCTAC GGGGGTGACT GCGGGGTTGA TGCATAGTTT CTGA
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Protein sequence | MPLPSPITLA TPMNTKTLVL ITLAAAPLSA LAQSSITLYG IADTGVRYTS GLTAANAASN TSGAALSSGV NTTSRFGFRG REDLGGGMYA LFNLETGLNL DTGTTANSSK FFDRAAIVGL GGNWGQVTAG RQTNLLADAI SPVDPVGMRF AAFNPNIATA ALSSHGLGVE YGSAGATTGS YRLDNSVKYT GRLGGLTARA MYSFGETAQG GSARSSAGAG LAYGTKTWTV SGAYQRFKTA DQWELKAATL GASYKWDNLR LALNTARSDG QTNATTARTV QRVHSLGATW SARSTLDLTA ALYRVERERS GRAADGYTRA LLFAEYKLSR RSKLYAELDR THWSGGFQGG QNKDVATGVT AGLMHSF
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