| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2505 |
|---|
| Symbol | |
|---|
| ID | 5748068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2768201 |
|---|
| End bp | 2768869 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641297587 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_001563528 |
|---|
| Protein GI | 160897946 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.927906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGCG CGCACCCGCA GGAACCTGCC CGGTTTTCCC CACTCCATCC CCCAGCCCTT
TGGCTTTCAC AGGAGATTCG CATGACCACA CGCCGCATTG CGTCGCTTTC CCTGGCCGGC
ATGGCCCTGG CCGCTTCCCT TTTCACCGCC CTGCCCGCCA TGGCGCAGAA CGCCACGCCC
AAGGTGCAGA TCAAGACCAG CATGGGCGAC ATCGTGCTGG AGCTGAACGA AGCCAAGGCT
CCCAAGACCG TGGCCAACTT CATGCAGTAC GTGCGAGACA AGCACTATGA CGGCACGGTG
TTCCACCGCG TGATGGACGG CTTCATGATC CAGGGCGGCG GCATGGATGC CAGCCTCAAG
GAAAAGCCCA CGCGCGCGCC GATTCCGCTG GAGGCGGACA ACGGCCTCAA GAATGACCGG
GGCACCATCG CCATGGCGCG CACGGGCAAC CCCAACTCGG CCACCTCGCA GTTCTTCATC
AACGTGGTGA ACAACGACAT GCTCAACGCG CCCAAGCCTG ACGGACACGG CTACGCCGTC
TTCGGCCGCG TGGTCCAGGG CATGGATGTG GTGGACAAAA TCCGCACGGT GGCCACGGGC
AACCAGGGCA TGCACCAGAA TGTACCCACC AAGCCGGTGA CCATCCTCTC GGCCACCGAA
GTCAAGTAA
|
|---|
| Protein sequence | MPGAHPQEPA RFSPLHPPAL WLSQEIRMTT RRIASLSLAG MALAASLFTA LPAMAQNATP
KVQIKTSMGD IVLELNEAKA PKTVANFMQY VRDKHYDGTV FHRVMDGFMI QGGGMDASLK
EKPTRAPIPL EADNGLKNDR GTIAMARTGN PNSATSQFFI NVVNNDMLNA PKPDGHGYAV
FGRVVQGMDV VDKIRTVATG NQGMHQNVPT KPVTILSATE VK
|
|---|
| |