| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2499 |
|---|
| Symbol | |
|---|
| ID | 5748062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2761494 |
|---|
| End bp | 2763674 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641297581 |
|---|
| Product | gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001563522 |
|---|
| Protein GI | 160897940 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG3258] Cytochrome c |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.345014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.965839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT CGCTCAAGCA AGGCTTGCTG TGCGTGGCCG CGCTCTCGGC CGCCGCCTGG
CAACTGGCCA TTTCGGCGCC GGCGCCCGGA GTGGACCATG CGCAAATGCC ACAAATCATT
GATGACCTGC CTGCCGATTA CGCGGCGGAC CTGACGGCGG AGCAAAGAAC CCTGGTCGAT
CGCGGCCGAT ATATCGCACG CCTGGGCGAT TGTGTTGCCT GCCACACCGG CAATAAATCC
CAGCCCATGG GTGGTGGGCT GGCGCTGGAG ACGCCATTCG GCAAGATCTA TTCCACCAAT
ATCTCGCCCG ACGCCGATAC GGGCATGGGC AAATACAGCT TCGAGCAGTT CGACCGCGCC
ATGCGCAAGG GCGTCGCGGC CGATGGCCGC AACATGTACC CGGCCATGCC CTATCCCTCC
TACGCCAAGA TGACGGCCGA GGACATGCAG GCCCTGTACG CCTATCTGCT GCAGGGCGTG
GCGCCCGTGA AGGCGGCCAA CAAGGAATCC GACCTGGGCT TTCCCTTCAA CCAGCGCTGG
GGCCTGGCGC TGTGGAACTG GGTGTTTCTG GATGACACGC CCTTCCAGCC CCAACCGCAG
CAAACTGCCC AGTGGAACCG GGGTGCCTAC CTGGTGCAGG GCCTGGGCCA CTGCGGCGCC
TGCCATACGC CGCGCGGCGT GGGCTTCCAG GAAAAGACCA TGACCGGCGA GGGCAGCAAG
GGCGAGTATT TCCTGGCCGG CGAGACCGTG GAGAACTGGC GCGCGCTGAG CCTGCGCAAT
CTGTGGACAC CCGAGGAAAC CGCCCAGTTG CTCAAGACCG GGCGCAACAG CCACGGCACG
GTCTCCGGCA ACATGGTCGA CGTGGTGCAG CACAGCACGC AGTACATGAG CGATGCGGAC
CTGCTGGCCA TTGGCACTTA TCTGAAGTCA CTGCCCGCAG GCAAGAACGA CCTGCCCATG
CAGGTGGCCC AGGGGCCGGG GCCGGTCATC GCCCCGCATC CGGCGTCGCA GGTTTCCGTG
CATGCGCCGT CCGCCACCTC GGCAGTGTCT TCGGACGTGC CTGCCGATCT CTACGCCAGC
CGTGGCGGCC TGGGCTATCT GCAGTTCTGC GCCGACTGCC ACCGTGCCGA TGGCGGCGGC
GTGAAGGACG TGTTCCCGCC GCTGGCCGGC AATTTCTCGC TGCAGTCGCA GGACCCGTCC
ACGCTGATCC ATCTGATGCT GGTGGGCTGG AAGGCGCCCG TCACGCAAAG CCATGCGCGG
CCGCTGACCA TGCCGGCCTT CGCACAGCTT AAGGATGCGG AGATTGCCGA CATCCTCAAC
TTCGCCCGCA AGAGCTGGGG CCGTGCCGAT GCGCGCGAGA TCCATGCCAA GGAGGTGCAA
TCCATGCGCA AGCAGCTCGA TGCCAAGGGC GAAAGCGCAC GCCCCTTCGA GACGCCACGC
CTGGCCGCCA TGCTGGACGA ATCCAACGCG AAGCAACTGG TCTACGGCGC CCGCCTGAAC
ATAGAGACGC GTGACCTGCT GCCCAGGAAT GTGGGCAATG CGCTGAACTG CGCCAGCTGC
CATCTGAACG CGGGCACGGT GGCCGATGGT TCGCCCTACA TCGGTGTCTC GGCCTTCTTC
CCCGGCTATG CGCCGCGCGC GGGCCGCGTC ATCACGCTGG AGGATCGCAT CAATGGCTGC
TTCCTGCGCT CCATGAACGG CAAGCCGCTG CCGCTGGAGT CCGACGAGAT CAAGGCCATG
GTGGCCTACT TCGACTGGAT GCGCCGCGAA ACCAAACCCG AAGACAAGGT CGAAGGCCGG
GGCGTGGGCA AGATCAGCCA GTCCATCTTG CCCAACGTGG ACAACGGCAA GAAGGTCTAT
GCGGCCCAGT GCGCGGTCTG CCATGGCGGC GAGGGCGAGG GCGTGAAGAA CGCCAAGGGC
CAGTGGGTCT ATCCGCCGCT GTGGGGTGAC GAGTCCTTCA ACATCGGCGC GGGCATGGCG
CGCACCTACA CGGCAGCGGC CTTCGTCAAG CGCAACATGC CCATCGCCTT CCATGGCAAC
TTCCCGCTGG GCCAGGGCGG CCTCAGCGAC CAGGAGGCCG TGGACGTGGC CGAGTACTTC
AGCCACCAGC CGCGCCCGGA CTTTGCCAAC AAGCACAAGG ACTGGCCCAA GGACAAGAAG
CCGGCCGATG CGCGGTACTG A
|
|---|
| Protein sequence | MKLSLKQGLL CVAALSAAAW QLAISAPAPG VDHAQMPQII DDLPADYAAD LTAEQRTLVD
RGRYIARLGD CVACHTGNKS QPMGGGLALE TPFGKIYSTN ISPDADTGMG KYSFEQFDRA
MRKGVAADGR NMYPAMPYPS YAKMTAEDMQ ALYAYLLQGV APVKAANKES DLGFPFNQRW
GLALWNWVFL DDTPFQPQPQ QTAQWNRGAY LVQGLGHCGA CHTPRGVGFQ EKTMTGEGSK
GEYFLAGETV ENWRALSLRN LWTPEETAQL LKTGRNSHGT VSGNMVDVVQ HSTQYMSDAD
LLAIGTYLKS LPAGKNDLPM QVAQGPGPVI APHPASQVSV HAPSATSAVS SDVPADLYAS
RGGLGYLQFC ADCHRADGGG VKDVFPPLAG NFSLQSQDPS TLIHLMLVGW KAPVTQSHAR
PLTMPAFAQL KDAEIADILN FARKSWGRAD AREIHAKEVQ SMRKQLDAKG ESARPFETPR
LAAMLDESNA KQLVYGARLN IETRDLLPRN VGNALNCASC HLNAGTVADG SPYIGVSAFF
PGYAPRAGRV ITLEDRINGC FLRSMNGKPL PLESDEIKAM VAYFDWMRRE TKPEDKVEGR
GVGKISQSIL PNVDNGKKVY AAQCAVCHGG EGEGVKNAKG QWVYPPLWGD ESFNIGAGMA
RTYTAAAFVK RNMPIAFHGN FPLGQGGLSD QEAVDVAEYF SHQPRPDFAN KHKDWPKDKK
PADARY
|
|---|
| |