Gene Daci_2491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2491 
Symbol 
ID5748054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2753318 
End bp2753761 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID641297573 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001563514 
Protein GI160897932 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.254685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.906535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACCG TCTATGTCCT CAATGGCCCG AACCTGAACC TGCTGGGCCT GCGTGAACCC 
GCCATCTATG GCTCCCAGAC CCTGGCCGAT GTGCGTGCGC TGTGCGAAGC CGCCTGCGCG
CGCTACGGGC TGGGGCTGGA GTTTCGCCAG AGCAACCATG AAGGCGAACT GGTGGACTGG
GTCCACGAAG CCGGCCGTGT GCACGCCGAA GGCCGCCTGG CCGGCCTGAT CTTCAACGCC
GCCGCCTACA CCCACACCAG CGTGGCCCTG CTGGATGCCG TCAAGGGCAC GGGCGTGCCG
CTGGTGGAGC TGCACATCAG CAACGTGCAT GCGCGCGAGA GCTTCCGCCA CCACTCCTAC
CTGTCGGCCG CCGCGCGCGC CGTGATGTGC GGCTTTGGCG TGGCCGGCTA CGGCCTGGCC
ATTGACGCCG TGGCCCAGTG GTGA
 
Protein sequence
MKTVYVLNGP NLNLLGLREP AIYGSQTLAD VRALCEAACA RYGLGLEFRQ SNHEGELVDW 
VHEAGRVHAE GRLAGLIFNA AAYTHTSVAL LDAVKGTGVP LVELHISNVH ARESFRHHSY
LSAAARAVMC GFGVAGYGLA IDAVAQW