| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2474 |
|---|
| Symbol | |
|---|
| ID | 5748037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2732809 |
|---|
| End bp | 2733762 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641297556 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_001563497 |
|---|
| Protein GI | 160897915 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.188866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.279197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATAC AGTGGTTCCC CGGTCACATG AATCTCACGC GCAAGGTGAT CACCGAGCGC
GTCAAGGAAA TCGATGTGGT CATCGAAGTG CTGGATGCGC GCCTGCCGGG GTCGAGCAGC
AACCCGCTGC TGCAGGAGCT GACGGGCCAC AAGCCGCGCC TGCAGGTGCT CAACAAGCAG
GACCTGGCCG ATGCCGCGCG CACGCCGCTG TGGCTGGACT GGTACAACGC CCAGAGCGAC
ACGCGCGCCA TTGCGCTGGA CGCCTCCGAG CCCGCGCCCA CGCGCCGGCT GATCGAGGCC
TGCAAGCTGC TGGCCCCCAA TCGTGGCGGC ATGGCCAAGC CCATGCGCGT GCTGATCTGC
GGCATTCCCA ACGTGGGCAA GTCCACGCTG ATCAACTCCA TGAGCGGCAA GCGGCAGGCC
AAGACGGGGG ACGAGGCCGG CATCACCAAG CTGGAGCAGC GCATCGTGCT GGCCGACGAC
TTCTACCTCT GGGACACGCC CGGCATGCTG TGGCCGCGCA TCATCGTCGA GCAAAGCGGC
TACAACCTGG CCGCCAGCGG CGCCGTGGGC CGCAACGCCT ATGACGAGGA GCTGGTGGCG
CTGGAGCTGC TGGGCTATCT GCAGAAGAAC TACGCGGACC TGCTGGAGGC GCGCTACAAG
CTGGGCCTGG ACAACGAACG CATTGCCGCC CTGCATGACG ACGAACTGCT GGACGCCATC
GGCCGGCGCC GCGGCGCCAT GATGAGCGGC GGACGTGTCA ATCTGCAAAA AGCTGCCGAG
CTGGTGCTCA CGGATTTCCG CGGAGCGATC CTGGGCCGCA TCACGCTGGA GACGCCCGAC
GAATACGCGC AGTGGCTGGC CGTGGGCCAG GAACGCGATG CCGAGCGCCA GGCGCGCAAG
GACGCCAGCA AGGCGCGCAA GCGCCCCCCG CGCGAGCGCA AAAGCGCGCC CTGA
|
|---|
| Protein sequence | MAIQWFPGHM NLTRKVITER VKEIDVVIEV LDARLPGSSS NPLLQELTGH KPRLQVLNKQ
DLADAARTPL WLDWYNAQSD TRAIALDASE PAPTRRLIEA CKLLAPNRGG MAKPMRVLIC
GIPNVGKSTL INSMSGKRQA KTGDEAGITK LEQRIVLADD FYLWDTPGML WPRIIVEQSG
YNLAASGAVG RNAYDEELVA LELLGYLQKN YADLLEARYK LGLDNERIAA LHDDELLDAI
GRRRGAMMSG GRVNLQKAAE LVLTDFRGAI LGRITLETPD EYAQWLAVGQ ERDAERQARK
DASKARKRPP RERKSAP
|
|---|
| |