Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2405 |
Symbol | |
ID | 5747968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2654893 |
End bp | 2656017 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641297487 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001563428 |
Protein GI | 160897846 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.44174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTCA TCGAATCCAT TGAAGTCTGC GTTGCCCGCG TGCCGCTGGA CAAGGTCACC TACCTGTCGA ACCGCACCGT GGTCGACCGC CACTACGGGC TGGTCAAGGT CCGCAGCAGC GACGGCGTCG AAGGCATCGG CTTTTGCTAT GTCGGCAATG CGGCGGGCGA GCTGTTCCGC GTAGCGGTCG AGCAACTGCT CGGTCCTGTG CTGCTGGGCC GCGATTGCCT GGCCGTCGAA GGGCTGTGGA AGGAGATGTA CCAGGAGGCG CTGCTGCAAG GCCGCATGGG CACCGTGATG CGCGCACTGA GCGCACTCGA CATCGCGCTG TGGGATCTCA ATGCCCGCAC CGCCCAGCTG CCGTTGCACA AGTACCTGGG CGCGGTGGAG CTGGACACGG TGCCGGCCTA TGCCAGCGGC GGCTACTACG TGGACGGCAA GACCGCCGGC CATGTCGGCG AGGAGATGGC CGGCTATGTC GAACTGGGTT TCAAGGCGGT CAAGATGAAG ACCGGCCGCT GGTCGCCCCA GGGCGAGGAG TCGCGCGTGA AGGCGGCGCG CGAGGCCATC GGCCCGGACG TGGAGCTCAT GCTGGACTGC AACAACGGCT GGGTGGACAC CGTGCAGGCC ATGCAGTACC TGCGCCGCAT GGAGGCATAC GACCCCTATT TCATCGAGGA GCCGTTCAGC CCCGACGATG TCGAAAGCCA CGCCCGCCTG GCAAAGCTCA CCCGCATTCC CGTGGCCACC GCGGAAATCG GCTATGGCCG CTGGTACCAC AAGCATCTGC TCGACATGGG CGCCGCATCC ATCCTGCAGA CCGACGCCGC AGTCTGCGGG GGCATCACCG AGTGGAAGCG CATCGCAGCC ATGGCGGCGG GCTATGGGCT GCAGATGTGT CCGCACTGGT TCCACGATGT GCACGCGCCG CTGGTGGCCG CGACCCCCAA TGCGCGCTAT GTCGAGTTCT TCTGGGATGA CCAGGTGCTT AACTTCCGCC GCCTGCTGGA CCGCCAGCTG GCGCAGGAAA AGGGCCGTGT CGTGCTGCAC CAGACGCCGG GGCTCGGCTT CAATTTCGAC GAGGCGCAGG TGTCCCGGTT CGGCCGCTGG ACCTCGGTGG CGTAA
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Protein sequence | MPLIESIEVC VARVPLDKVT YLSNRTVVDR HYGLVKVRSS DGVEGIGFCY VGNAAGELFR VAVEQLLGPV LLGRDCLAVE GLWKEMYQEA LLQGRMGTVM RALSALDIAL WDLNARTAQL PLHKYLGAVE LDTVPAYASG GYYVDGKTAG HVGEEMAGYV ELGFKAVKMK TGRWSPQGEE SRVKAAREAI GPDVELMLDC NNGWVDTVQA MQYLRRMEAY DPYFIEEPFS PDDVESHARL AKLTRIPVAT AEIGYGRWYH KHLLDMGAAS ILQTDAAVCG GITEWKRIAA MAAGYGLQMC PHWFHDVHAP LVAATPNARY VEFFWDDQVL NFRRLLDRQL AQEKGRVVLH QTPGLGFNFD EAQVSRFGRW TSVA
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