| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2389 |
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| Symbol | |
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| ID | 5747952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2635864 |
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| End bp | 2637153 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641297471 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001563412 |
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| Protein GI | 160897830 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCT TCGACAAGCT CATCAACGAC TTCCAAAGCT CCAGCGCCTG GCTGGAGTTC
TCCGTGCTCA TCGCCTGCCT GCTGCTGGCC TACGGCGCCA TGCGCGGCCT GCATGCGCGC
TACGGCCATC TGAACGATGG AAAGCCCTCC GTATGGATTG GCCGCCATGC GCTCGATGGC
GCCCTGTTCC CGCTGCTGGC GCTGGTGCTG GTCTTCACCA GCCAGGAGAT CCTGGCGCGG
TTTTCCACGG TGTTCTGGTT GCGCGTGGCC GTGTCGCTGC TGGTGTCCCT GTCGGTGATC
CGCTTCGTGG CGCGGGTGCT CAGCCGGACC TTCCCCCACT CCACCGTGGT GCGCCTGATC
GAACGCATCT TCTCCTGGCT GGCCTGGGGC GCGGCCGTGC TGCACAGCAT CGGCCTGCTG
CCGCAGGTCA TGGAGGAGCT CGAGGCCTTG CAGTTCAACA TCGGCAAGAC GCCGGTCAGC
CTGCTCAACC TGATCGAGGG CACGCTGTCG GCGGGGCTGA TGATGGTGGC CGTGCTCTGG
CTGTCCACGC TGTTCGAGCA GAAGGTCATC AACCAGTGGG TCAGCGACCT GTCCATGCGC
AAGGTGGCCA TGAACATCAC GCGCAGCGTG CTGATCCTGG TGGGCCTGCT GGTCTCGCTG
TCCATGGTGG GCGTGGACCT GACGGCGCTG TCCGTCATGG GCGGCGCCAT CGGCGTGGGC
CTGGGTTTCG GCATGCAGAA GATCGCCTCC AACTATGTGA GCGGCTTTCT GGTGCTGATC
GAGCGCGCGC TGCGCATCGG CGACAACGTG CGCGTGGATG GCTTCGAGGG CCGCATCACC
GACATCCGCA CGCGCTACAC CATCATCCGC GCGCTCAACG GCCGCGAATC CATCGTACCC
AACGAGACGC TGATCACCCA GCGTGTCGAA AACCTCACCG GATTCGACGT CAAGTTCGGC
CTGTCCACCA ACATCGTCGT GGGCATGGAC AGCGATGTGG AGCAGGTGCG CGGCATCCTG
CTCGAAGCCG CAGCCGCCCA GCCGCGCGTG CTCAAGACGC CCGCGCCTTC GGTGGCTCTG
GTCGACTTCG TCGAGCAGGG TCTGCAGTTC AGTCTCAGCT ACTACATCAA CGACCCGCAA
AATGGCCAGG GCAATGTGCG CTCCGAGGTG AACCTCGCCG TGCTGCGCGG CCTGCGTGCT
GCGGGCGTGA GCCTGCCAGT CCCCAAGCAG GTGGTACAGA TCACCGAACG CGGGGGCGTG
GTGGCTCAGG CAGCAGAGAA AAGCAGCTAG
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| Protein sequence | MDIFDKLIND FQSSSAWLEF SVLIACLLLA YGAMRGLHAR YGHLNDGKPS VWIGRHALDG
ALFPLLALVL VFTSQEILAR FSTVFWLRVA VSLLVSLSVI RFVARVLSRT FPHSTVVRLI
ERIFSWLAWG AAVLHSIGLL PQVMEELEAL QFNIGKTPVS LLNLIEGTLS AGLMMVAVLW
LSTLFEQKVI NQWVSDLSMR KVAMNITRSV LILVGLLVSL SMVGVDLTAL SVMGGAIGVG
LGFGMQKIAS NYVSGFLVLI ERALRIGDNV RVDGFEGRIT DIRTRYTIIR ALNGRESIVP
NETLITQRVE NLTGFDVKFG LSTNIVVGMD SDVEQVRGIL LEAAAAQPRV LKTPAPSVAL
VDFVEQGLQF SLSYYINDPQ NGQGNVRSEV NLAVLRGLRA AGVSLPVPKQ VVQITERGGV
VAQAAEKSS
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