Gene Daci_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2388 
Symbol 
ID5747951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2634962 
End bp2635771 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID641297470 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001563411 
Protein GI160897829 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA GCACCCCTCC TTCTGAAGCC AGCCCCCTGC TCGACGTGCA GCGCGACGCG 
CGCGGCGTCG TGCGGCTCAC GCTCAACGAC CCGCAGCGCT TCAATGCCCT GGGCGAGCAG
ATGCTCACGC AGCTGCAGCA GGCGCTGGAC GACGTGGCGC GCGACGAGTC CGTGCGCGTG
GTCGTGCTGT CTGCGGCCGG CAAGGCCTTT TGCGCGGGGC ACAACCTCAA GGACATGGCG
GCCCATCCGC AGCTGGACTA CTACCAGAAG CTGTTCGCCC AGTGCAGCCG CATGATGCTG
TCCATCCACC GGCTGCCCGT TCCCGTGATC GCGCGCGTGC ACGGCATTGC CACGGCGGCA
GGCTGCCAGC TCGTGGCCCA GTGCGATCTG GCCGTTGCTG CGCAGGCGGC ACGCTTTGCC
ACCAGCGGCA TCCACTACGG CCTGTTCTGC GCCACCCCCA GCGTGCCGCT GGTGCGCAAC
GTGCCGGCCA AGCAGGCCAT GGAGATGCTG CTCACGGGCG ACTTCATCGA CGCCCAGCAG
GCGCTGGAGC AGGGCCTGGT CAACCGCGTG GTGGCCGAGG AGGCGCTGGA CGATGCAGTG
GAGCACTTCG TGCAGTCCAT CGTCAGCAAG CCCCGTGCGG CCGTGGCCAT GGGCAAGGCG
CTGGTCTACC GGCAGCGCGA GATGGGCATC GAGGCGGCCT ACCAACTGGC CGGCCAGACC
ATGGCCGCCA ACATGATGGA TGCCGACGCC CAGGAGGGCG CCCAGGCCTT CGCCGCCAAG
CGCGAACCGG CCTGGAAGAC GGGCCGCTGA
 
Protein sequence
MNASTPPSEA SPLLDVQRDA RGVVRLTLND PQRFNALGEQ MLTQLQQALD DVARDESVRV 
VVLSAAGKAF CAGHNLKDMA AHPQLDYYQK LFAQCSRMML SIHRLPVPVI ARVHGIATAA
GCQLVAQCDL AVAAQAARFA TSGIHYGLFC ATPSVPLVRN VPAKQAMEML LTGDFIDAQQ
ALEQGLVNRV VAEEALDDAV EHFVQSIVSK PRAAVAMGKA LVYRQREMGI EAAYQLAGQT
MAANMMDADA QEGAQAFAAK REPAWKTGR