Gene Daci_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2372 
Symbol 
ID5747935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2615672 
End bp2617411 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content69% 
IMG OID641297454 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_001563395 
Protein GI160897813 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTGA ATCTGCCGGT CAGTACGCGC GAGTACTCGT TTCCCAAGGG CCAGACCCTG 
GTCTCCACCA CGGACCTGAA GGGCCGCATC CTCTACTGCA ACCCGATGTT CATCGAGGTC
AGCGGCTACG AGCGCGAAGA CCTGCTGGGC CAGCCCCACA ACATGATCCG CCACCCCGAC
ATGCCCGAGG AAGCCTTCCG CGACATGTGG GAGACCATCT CGGCGGGCCT GCCCTGGTCC
GCCCCCGTGA AGAACCGGCG CAAGAACGGC GACTTCTACT GGGTCATGGC CAATGTCACC
CCGCTGATGG ATGGCGACCG GCCCTCGGGC TACATGTCGG TGCGCACCGA GGCTACGCGC
GAGCAGACCG ATGCGGCCGA GCGCCTCTAC GCCACCATGC GCGCCGAGAA GGACGCCGGG
CGCCGGGTCC ACGTGCTGCG TGCAGGCCAC CTGTTGCGCA ACAACCTGCG CGGCCGCCTG
GCCAGCGCAT TGAGCCTGGG CCTGGCCGGC AAGCTGGTGC TGATCTTCTT CATGGTGGTG
GCGGCGGCCT TTGGCGCGGC GCTGGCCGGT GGGCATACGC TGGACGCATG GTCTGCGCTG
GCCTGGCTGG CGGTCTGCAT CTTCACGGGC CTGGCCGGGG CCTGGGCCTA CCGGCTGACC
GTGGCGCCGC TGGCGCAGAT GGTGCTGCTG GCCAACCGCC TGGCGGCCGG CGACCTGACG
CAGACCATAC GCATCACGCG CAAGGACGTG GTGGGCGATC TGCAGAAGGC GCTGAGCCAG
CTCAACGTGA ACCTGCTGTC CATCGTGCGC GATGCGCGCG AGGAAAGCGA CAAGATGCAG
ATCTCCAGCC GGGAAATCGC GCAGGGCAAC CATGACCTGT CCGCGCGCAC CGAAACCCAG
GCGGGCAACC TGCAGCAGAC GGCGGCCTCC ATGGAGGAGA TCACGGGCAC CGTCAAGCAC
ACGGCCGACT CGGCCCGCCA GGCCACGGAC CTGGCCGCCC AGGCCAGCGA GGTGGCCGAA
CGCAGCAGCG GCGCCGTCGA TGGCGTGGCC GCCACCATGA AGCAGATCCA GGCCGCGTCG
GGGCGCATCG GCGAGATCAC GCAGCTCATC GACTCCATCG CCTTCCAGAC CAATATCCTG
GCGCTGAACG CTGCCGTGGA GGCCGCGCGC GCAGGCGACC AGGGCCGGGG CTTTGCGGTC
GTGGCGGCCG AGGTGCGCAG CCTCTCGCAG CGCACGCTGG CGGCGGCCAA GGAGATCCGC
GAGCTCATCG ACGACTCCGC CGCCAAGGTG CTGGACGGCA ACCAGAGGAC CGAGGTGGCG
CAGAAGACCA TGATCGAATC GCTGGATCTG GTGCGGCGCG TGAGCCTGCT GATCGGCGAG
ATCCACAGCG CCTCCAGCGA GCAGCTCAGC GGCATCTCGC AGGTCAACGC GGCCGTGGCG
CATCTGGACA GCATCACGCA GCAGAACGCG GCCTTGGTCG AGCAGAACGC GGCATCGGCC
ATGGCCCTGC AGGCCCAGGC GCAGACCGTG TCGGAAACCG TGCAGGTGTT CCGGCTGGAC
GCCACGGGCC GCTCGCCTGC CGCAGTGGGC GATGCCGTGG CCCTGCGCCG GTCCATGAAG
GCCCAGGCAC AGAGCCAGGC AGGCGGCCAG GCACGCAGCC AGGCACGCAA CCAGGTGCAG
AGCCCGCCAC AGATGCGGCA GGCGCGCGCG CAGCCGCAGA GGGTGCTGAC CACGACCTGA
 
Protein sequence
MRVNLPVSTR EYSFPKGQTL VSTTDLKGRI LYCNPMFIEV SGYEREDLLG QPHNMIRHPD 
MPEEAFRDMW ETISAGLPWS APVKNRRKNG DFYWVMANVT PLMDGDRPSG YMSVRTEATR
EQTDAAERLY ATMRAEKDAG RRVHVLRAGH LLRNNLRGRL ASALSLGLAG KLVLIFFMVV
AAAFGAALAG GHTLDAWSAL AWLAVCIFTG LAGAWAYRLT VAPLAQMVLL ANRLAAGDLT
QTIRITRKDV VGDLQKALSQ LNVNLLSIVR DAREESDKMQ ISSREIAQGN HDLSARTETQ
AGNLQQTAAS MEEITGTVKH TADSARQATD LAAQASEVAE RSSGAVDGVA ATMKQIQAAS
GRIGEITQLI DSIAFQTNIL ALNAAVEAAR AGDQGRGFAV VAAEVRSLSQ RTLAAAKEIR
ELIDDSAAKV LDGNQRTEVA QKTMIESLDL VRRVSLLIGE IHSASSEQLS GISQVNAAVA
HLDSITQQNA ALVEQNAASA MALQAQAQTV SETVQVFRLD ATGRSPAAVG DAVALRRSMK
AQAQSQAGGQ ARSQARNQVQ SPPQMRQARA QPQRVLTTT