Gene Daci_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2338 
Symbol 
ID5747901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2577371 
End bp2578561 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content67% 
IMG OID641297420 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001563361 
Protein GI160897779 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.61634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.90574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATC ACATCTTGAT CATCGGAGGG GGCATTGGCG GCACCATGAC CGCCAACCAC 
CTGGTCAGCA AGCTGTATCC GGAGGTGGTC ACGGGCAAGG TGCGCATCAC CATGCTGTCG
AACTCGCCCT GGCATTACTA CAAGCCTGCC TTCATGTACG TGGCCTTCAA TGCCTTCTTC
CGCGACGAAC TGCGGCGCAG GCAGCGCGGC CTGCTGCGGC CCGAGATCGA CTTCCAGGTG
GAAGAGGTGG AGCGTTTCGA CTTTGCGCTG CAGGCCGTGC ACTGCAGGAG CGGCAAGCGC
TTCGGCTACG ACCACCTGGT GATCTCCACG GGCTGCGTGC CCTCGCCCGA GCGCATCGAA
GGCCTGGCCG AGGCCGGCGA CCACTTCTAC CAGCACGCGC CCGCGCGGCA GCTGGCCGAC
AAGCTGGCGC GCATAGAAAA GGGCCGCATC TTCGTCACCG TGACCTTTCC CAAGACGCCC
AATGTGCCGC ACCAGTGCGG CATCGCGCCC ATAGAGACCA CGCTGATGCT GGACGACCTG
CTGCGCCGGC GCGGCGTGCG CGACAAGGTG GAGATCGTCT ACACCTATCC CACGGTCTCG
CAGCTGCTGC GCAACTGCCT GTTCCTGCAG AAGGACACCT GCGAGATCCT GCCCACGGTG
TTCGAGCAGC GCGGCATTCG CCACCAGCGC GGCTTCACGC TGGCGCGCGT GGACCCCGAG
GCCAAGGTGG CCCACTCGGA GGAGGGCCAG TCCGAGGACT TCGACATCCT CATGGCCACG
CCGCCCATAC GCGCCGTGCA GGCCGTGCGC GACTGCGGCC TGTCGCAGGC GCAGGACGGC
GAGGGCTGGC TGCCCACCGA CCACGAGACC ATGCAGGTGC TGGGCCAGAG CCATGTCTAT
GTGCTGGGCG ATACGGTGGA CCTGCCGGTG AGCAAGGCCG GCGGCGCCTG CCACAACCAG
TCGCCCGTGG TGGTGAACAA CATCGCCTCG CAGATCCGCT TCGGCCGCAC CAGCGATGCC
TACGACGGGC GCGTGGTGGC CATCGCCCAG ATGGGCCTGG ACGGCGGCAT GCCGCTTTGG
TACGACTACC AGGTCGACGT CAAGCCCACG CCGCCGACCA AGGTCGGCTC GATGATGCGC
AAGGGCTTCA ACCGCGGCAT GTACTGGGCC GTGGCCCGCG CCCTGGTCTG A
 
Protein sequence
MAHHILIIGG GIGGTMTANH LVSKLYPEVV TGKVRITMLS NSPWHYYKPA FMYVAFNAFF 
RDELRRRQRG LLRPEIDFQV EEVERFDFAL QAVHCRSGKR FGYDHLVIST GCVPSPERIE
GLAEAGDHFY QHAPARQLAD KLARIEKGRI FVTVTFPKTP NVPHQCGIAP IETTLMLDDL
LRRRGVRDKV EIVYTYPTVS QLLRNCLFLQ KDTCEILPTV FEQRGIRHQR GFTLARVDPE
AKVAHSEEGQ SEDFDILMAT PPIRAVQAVR DCGLSQAQDG EGWLPTDHET MQVLGQSHVY
VLGDTVDLPV SKAGGACHNQ SPVVVNNIAS QIRFGRTSDA YDGRVVAIAQ MGLDGGMPLW
YDYQVDVKPT PPTKVGSMMR KGFNRGMYWA VARALV