Gene Daci_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2332 
Symbol 
ID5747895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2571131 
End bp2571931 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content66% 
IMG OID641297414 
ProductBeta-lactamase 
Protein accessionYP_001563355 
Protein GI160897773 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.428372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.506587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA GAAATCTGAT GTGCGCCGCG CTGCTCGCCT TTCTGTCACA GGCGGCCCTG 
GCGGCTGCCG AACTGCAGGA CAAGCCCGAA TGGGACCGCT TCTTTGCCGA TGCCAAGGTC
GATGGCAGCA TCGTCGTGGT CGATGCCAGA GGCCAGGCCG AAGCCGTCTA CGTCCACAAC
CGTGACCGGG CGGCGCGGCG CTACTCGCCC GCCTCCACCT TCAAGATCCC GCACAGCCTG
TTCGCACTGG ATGCCGGGCT GTTGCGCGAT GAATTCCAGC GCATTCCCTG GGATGGCGTG
AAGCGCCAGT TGCCGGCCTG GAATGCCGAT CAGGACCTGC GCTCGGCCAT GCGCAACTCC
ACCGTCTGGG TGTACGAAGG CTTTGCCAGG GAGCTTGGCA GCGCGCGTGA GGCTGCCTAC
ATGCGCAAGA TCGACTACGG CAATGCGCTG GCCACAGGCG AGGCGCCGTT CTGGGTGGAG
GGCGACCTGG CCATCTCGGC GCTGGAGCAG GTGGCCTTCC TGCAGCGGCT GTACCGCAAT
CGGCTGCCAT TGCCGGTGGA GCACCAGCGG CTGGTGAAGG ACGTGATGAT CAACGAGGCA
GGCCCGGACT GGATACTGCG CGCCAAAACC GGCTGGACGG GCCGTATCGG CTGGTGGGTG
GGCTGGGTGG AATGGCCGGC CGGCCCCGTG TTCTTCGCCA TGAACATGGA CACGCCCCAC
CGGCTGGCCG ACCTGCCCAA GCGCCAGGAC ATCACGCGCG ACATCCTGCG CTCCATCAAC
GCGTTGCCCA AGGCGCCGTA G
 
Protein sequence
MNRRNLMCAA LLAFLSQAAL AAAELQDKPE WDRFFADAKV DGSIVVVDAR GQAEAVYVHN 
RDRAARRYSP ASTFKIPHSL FALDAGLLRD EFQRIPWDGV KRQLPAWNAD QDLRSAMRNS
TVWVYEGFAR ELGSAREAAY MRKIDYGNAL ATGEAPFWVE GDLAISALEQ VAFLQRLYRN
RLPLPVEHQR LVKDVMINEA GPDWILRAKT GWTGRIGWWV GWVEWPAGPV FFAMNMDTPH
RLADLPKRQD ITRDILRSIN ALPKAP