Gene Daci_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2331 
Symbol 
ID5747894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2569561 
End bp2570901 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content69% 
IMG OID641297413 
Productammonium transporter 
Protein accessionYP_001563354 
Protein GI160897772 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.708148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGT GCGCACGGGC ATTGAGAACA TTGGTGGCGG GAGGATGGGT CGCGGTCCTG 
GGTGCGGCGC AGACGGCGCA GGCGGCCGAG CAGGCTATCA CCCGGCCATC GCTGGTGGCG
GTGGAATCCA TCAGCGCCGT GGACACGGTC TGGCTGATGA CGGCCACGGT GCTGGTGCTG
CTGATGACGC TGCCCGGCAT TGCGCTGTTC TATGCGGGCA TGGTGCGCCG CAAGAACGTG
CTCAACACCA TGGCCAGCGT GGTGGCGATT GCCTGCCTGG TGAGCATTCT GTGGTTTGCA
CTCGGCTACT CGCTGGCCTT CACGCCCGGC AATGCGTGGA TAGGCGGTGA TTCTCGCGCC
TGGTTTTCCG GCCTGGATTT CAACGCCGCC AAGGGCCTGG TGGCCGTGAG CCACCTGGCG
CCGCATGTGC CCGAAGCGGC CTATGCCATG TTCCAGCTGG CCTTTGCCGT GATCACCGCC
GCCTTGCTGG TGGGCGCCTG GGTGGAGCGC ATGCGCTTCG GTGCCATGCT GATCTTCGTG
GGGCTGTGGA GCCTGCTGGT GTATGCGCCG GTGGCGCACT GGGTGTGGGA GCCCGGGGGC
TGGCTGGCGC GCATGGGCGC GCTGGACTTT GCCGGAGGCA CCGTGGTGCA TGTGAACGCG
GGCGTGGCCG GCCTGGTCTG CGCCTGGTTC CTGCGGCCGC GCCGCGGCTA CGGGCACGAG
CCCTTCGAGC CCTACAACCT GGCCTTGACC ATGATGGGCG CAGCCCTGCT GTGGATGGGG
TGGTTCGGCT TCAACGCAGG CTCATCGCTG GCCGGGGACA GCCGCGCGGC GCTGGCGCTG
GCCGTCACCC ACATTGCCGC CAGCGCGGGC GCCCTGGCCT GGTCGCTGGC CGAGTACGTG
GTGCGCGGCA AGGCCACGCT GCTGGGGCTG TGCTCGGGGC TGGTCGGCGG CCTGGTGGCG
ATCACGCCGG CAGCGGGTTT CGTGACGCCG CTGTCGGCGC TGTGCATCGG CCTGATCGCC
GGTGTCGCCT GCTACTGGGG CGCCACGGGC CTCAAGCGGC TGCTGGGTGC GGACGATTCG
CTGGATGTGT TTGGCGTGCA TGGCGTGGGC GGCATCGTGG GCTCGCTGCT GACCGGCGTG
TTTGCCAGTC CGCAGATCGG CGGCGTGCAG GGCAGCGTTC TCACCCAGGC CGTGAGCGTG
CTGGCCGTGG CCTTGTTCAC GCTGGTGGCC ACGGCGGTGC TGCTGTGGCT GCTGGACATG
CTGATCGGCC TGCGCGTGGA TGAGGAAAGC GAGCTGCAGG GCCTGGACCT GGCGCTGCAC
CGCGAGCGCC TGAGTGGATG A
 
Protein sequence
MHRCARALRT LVAGGWVAVL GAAQTAQAAE QAITRPSLVA VESISAVDTV WLMTATVLVL 
LMTLPGIALF YAGMVRRKNV LNTMASVVAI ACLVSILWFA LGYSLAFTPG NAWIGGDSRA
WFSGLDFNAA KGLVAVSHLA PHVPEAAYAM FQLAFAVITA ALLVGAWVER MRFGAMLIFV
GLWSLLVYAP VAHWVWEPGG WLARMGALDF AGGTVVHVNA GVAGLVCAWF LRPRRGYGHE
PFEPYNLALT MMGAALLWMG WFGFNAGSSL AGDSRAALAL AVTHIAASAG ALAWSLAEYV
VRGKATLLGL CSGLVGGLVA ITPAAGFVTP LSALCIGLIA GVACYWGATG LKRLLGADDS
LDVFGVHGVG GIVGSLLTGV FASPQIGGVQ GSVLTQAVSV LAVALFTLVA TAVLLWLLDM
LIGLRVDEES ELQGLDLALH RERLSG