| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2317 |
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| Symbol | |
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| ID | 5747880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2550621 |
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| End bp | 2551802 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297399 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001563340 |
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| Protein GI | 160897758 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.788366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.425659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA ATCGCAAGTG GACCATTGGC GCCGTGGTGG GCGCCTGCAT CATCGCCGGG
GGCGCACTGT GGAAGGCCAG CGCCAAGCCC GCCACCCGGT ACGCGACGGC CGCCGTCACC
GTGGGCAACC TGGAGCAGAC CGTGCTGGCC GTGGGCCGGC TGCATGCCAA GGAGCTGGTT
GCCGTGGGCG CCCAGGTCTC CGGACAGGTC AAGCGCCTGC ATGTGGAACT GGGCCAGCAG
GTCAAGGCCG GCGACCTGAT CGCCGAAGTC GATGCCCAGC CGCAGCGCAT CAAGCTGCGC
AATGCCGAGG CCTCGGTCAC CGCGCTGCAG GCCCAGCTGG CCGCGCGGCG CGCGGCCCTC
GTCCAGGCCC GGCTCACCTT CCAGCGCCAG CAGGAACTGC TGCTGGCCGA CGCCACCTCG
CGCGCCGACC ATGAGGCCGC CAAGGCGGCG CTGGACACGG CCCAGGCCGA GGTCGGTGCC
CTGCAGGCCC AGATCGAGCA GGCACGCACC CAGGTGGAGA CCGAGCGCAT CAACCTGGGC
TACACCCGCA TCGTCGCGCC CATGGACGGC GTGATCGTGG CCGTGGTCAC CAAGCAGGGC
CAGACACTGA ACTCCTTCCA GACCACGCCC ACCATCGTCA TGCTGGCCAA GCTCGACGTG
ATGACCGTGC GTGCCGAGAT TGCCGAGGCC GACGTGGACA AGATCCAGCT CGGCCAGACA
GCATGGTTCA CCACGCTGGG CAGCAACCGC CAAAAACACA TGGCGAAGAT AGAGCGCATC
GAGCCCGCCC CCACCTCCAT CGTCAATGAC GCGGGCGGCG GCGCCTCGCC CGCTGCGGCC
ACGCCCGCCG CCAAGGCCAT CTACTACAAC GCCCAGTTCG ACGTACCCAA CCCGGATGGC
AAGCTGCGCC CTTCCATGAC CGCCCAGGTC ACCGTGCGCG TGGCCCAGGC CGACAAGGCC
GTGCTGGTGC CGACCGCCGC ACTGGGCAGC CGGGCAGAGG ACGACAGCTA CACCGTGCGC
GTGCGCGACG GCGAAGGCAA GGTCGCCGAG CGCAAGGTGC GCATCGGCCT GCGCACCAAT
GCCCAGGCCC AGGTGCTGTC GGGCCTGGAG GCGGGCGAGC AGGTGGTGAT AGGCGAGGCG
GGCCCGAACA ACGCCCCCGC CGCCGACCCC ATGGGAATAT GA
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| Protein sequence | MKFNRKWTIG AVVGACIIAG GALWKASAKP ATRYATAAVT VGNLEQTVLA VGRLHAKELV
AVGAQVSGQV KRLHVELGQQ VKAGDLIAEV DAQPQRIKLR NAEASVTALQ AQLAARRAAL
VQARLTFQRQ QELLLADATS RADHEAAKAA LDTAQAEVGA LQAQIEQART QVETERINLG
YTRIVAPMDG VIVAVVTKQG QTLNSFQTTP TIVMLAKLDV MTVRAEIAEA DVDKIQLGQT
AWFTTLGSNR QKHMAKIERI EPAPTSIVND AGGGASPAAA TPAAKAIYYN AQFDVPNPDG
KLRPSMTAQV TVRVAQADKA VLVPTAALGS RAEDDSYTVR VRDGEGKVAE RKVRIGLRTN
AQAQVLSGLE AGEQVVIGEA GPNNAPAADP MGI
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