Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2314 |
Symbol | |
ID | 5747877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2546209 |
End bp | 2547261 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641297396 |
Product | porin |
Protein accession | YP_001563337 |
Protein GI | 160897755 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.224998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAA GAACCATTCA ACGGCTGGGG ACGGCGCTTG CATTGGGCAC GGCCCTGGCG GCCCAGGCCC AGAGTTCGGT CACGCTCTAT GGGCGTGTGG TCGCGGGGGT GGACTACCAG AGCAATGTGT ACGACCCGGC CACGGGGGGC TCTGGCAATC TGTGGCGGGC CGTGGGCAAC CAGTGGGGCA CGAGCATGCT GGGTTTCAAG GGGGAGGAGG ACCTGGGCGG GGGGCTGCAT GCGCTGTTCA CGCTGGAGTC GGGCTTCAGC ATCGACGATG CCAAGTTCAA CGGCGCAGGT TTCTTCAACC GCCGCACCTT CGTGGGCCTG CGCAGCGGCT GGGGCACGCT GAAGCTGGGC AAGGACCTGT CGATCTCGGA TGCGCACTGG GCGCTGGACC CCACGGGCCA GCAGTTCATC GGCTCGGCCA CGCTGGTGCG GGGGCGCAAC TGGGGCGGGC ATGACAACAT GATTTCCTAC GAAACGCCCA GCTGGGGCGG CCTGGGCGTG CTGGCGCTGA CCGGCCTGGG CGAGCAGCCG CAGGGCGCAT CGCGGCTGCG CAAGGATGCG CTGTCCGTGT CCTATACCGC GCCCACGTTC GAGTTGCGCG CCATCTACGA TGTGGCCCGC GATGCCAATG GCCGCTTCAG CGATCTCTAC ACCACCTCCC GCAACCTGAC GCTGGGCGGC ACGGTGACGC TGTCCGCGTT CAAGCTGTTC GCGGGCTATG AGCAGCTGTC CGCGCCCGAC AGCGCAGCTG GCGTGCCCAA CAAGGCGCGG CAGTACTGGA TGGGCGCGCG CTACAAGGTG TCAGGCCCGC TGACGCTGAT CGGGGCGGGC TACCGCACCA CGGTCAACAA CGGCGGCGGC AGCGCCAACC TGTTCATGGC GGGCGCCGAC TACGCGCTGT CCAAGCGCAC GCTGCTGTAC GCCAGCGTGG GCAATGTGCG CAATGGCGGC AATGCGAACT TCTCGGTGGA GACCACCAAC AACAACCCGG CGCCGGGCGG CAGCCAGACC GGCTTCTACG TGGGCATGGC GCATTCGTTC TGA
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Protein sequence | MARRTIQRLG TALALGTALA AQAQSSVTLY GRVVAGVDYQ SNVYDPATGG SGNLWRAVGN QWGTSMLGFK GEEDLGGGLH ALFTLESGFS IDDAKFNGAG FFNRRTFVGL RSGWGTLKLG KDLSISDAHW ALDPTGQQFI GSATLVRGRN WGGHDNMISY ETPSWGGLGV LALTGLGEQP QGASRLRKDA LSVSYTAPTF ELRAIYDVAR DANGRFSDLY TTSRNLTLGG TVTLSAFKLF AGYEQLSAPD SAAGVPNKAR QYWMGARYKV SGPLTLIGAG YRTTVNNGGG SANLFMAGAD YALSKRTLLY ASVGNVRNGG NANFSVETTN NNPAPGGSQT GFYVGMAHSF
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