| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2313 |
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| Symbol | |
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| ID | 5747876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2543930 |
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| End bp | 2545873 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297395 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001563336 |
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| Protein GI | 160897754 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.379878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTC CCGATTCCAT CTTCACCCCC GCAGCCGGCG AAGCTCCAGA CGCACAGCGT
TTTTCCGACC TGCTGGCGCA GTCGCGCAAG CCGTTCCCGG CCTCCACCAA GAGCTATCTG
CAAGGCAGCC TGCACAGCGG CCTCAACGTG CCCGTGCGCG ATATCCAGCT GACCAATGGC
GAGCAGGTCA GCGTCTATGA CACCTCGGGC CCCTACACCG ATCCGGCCGT GGCCATCGAC
GTGCGCAGCG GCCTGCCTGG CGTGCGCAAT GCCTGGATCG AGTCGCGCGG CGACAGCGAG
TACTACGCCG GCCGCCTGCG CCAGGCCCTG GACGACGGCG GCAAGCGCGG CGAGGAAGAT
GAGCGCGTGG CCCGCCTGCG GGCCGAGGCC GCATCGCTGC AGCGCCAACC CCGCCGCGCC
AAGAGCGGCG GCAACGTCAC CCAGATGCAC TACGCGCGCA AGGGCATCAT CACGCCCGAG
ATGGAATACG TGGCCCTGCG CGAGAACGGC CGCCGCGAAT GGATGGCCGA GTACCAGCAG
GACGCCGCGC GCGAGGCGCG CCTGGCCGGC AACGGCCTGG GCGCCGCCAT CCCCAAGATC
ATCACGCCCG AGTTCGTGCG CGACGAAGTG GCGCGCGGCC GCGCCATCAT CCCGGCCAAC
ATCAACCACC CCGAGATCGA GCCCATGGCC ATCGGGCGCA ACTTCAAGGT CAAGATCAAC
GCCAACATCG GCAACTCGGC CGTCACCTCC AGCATCGAGG AAGAGGTCGA GAAGCTGGTC
TGGGCCATCC GCTGGGGTGC GGACAACGTG ATGGACCTGT CCACCGGCAA GAACATCCAC
ACCACGCGCG ACTGGATCAT CCGCAACTCG CCCGTGCCCA TCGGCACCGT GCCCATCTAC
CAGGCGCTGG AGAAAGTGGG CGGCATTGCC GAGGACCTGA CCTGGCCCAT CTTCCGCGAC
ACCCTGATCG AGCAGGCCGA GCAGGGCGTG GACTACTTCA CCATCCACGC CGGCGTGCGC
CTGGCCTACA TCCACCTCAC GGCCCAGCGC CGCACGGGCA TCGTCTCGCG CGGCGGCTCC
ATCATGGCCA AGTGGTGCAT GGCCCACCAC CGCGAGAGCT TCCTGTACGA GCACTTCGAG
GACATCTGCG ACATCATGAA GCAGTACGAC GTCAGCTTCT CGCTGGGCGA CGGACTGCGC
CCCGGCAGCG CCTCGGACGC CAATGACGAA GCCCAGTTCG CCGAACTCAA GACCCTGGGC
GAGCTGACCC AGCTGGCCTG GAAGCACGAC GTGCAGACCA TGATCGAAGG CCCCGGCCAC
GTGCCCATGC ACATGATCCA GGCCAACATG ACCGAGCAGC TCAAGCACTG CCACGAGGCG
CCGTTCTACA CCCTGGGCCC GCTGACCATC GACATCGCCC CCGGCTACGA CCACATCGCC
AGCGCCATCG GCGCGGCCAT GATCGGCTGG TTCGGCACCG CCATGCTGTG CTACGTCACG
CCCAAGGAAC ACCTGGGCCT GCCCGACCGC GACGACGTCA AGCAGGGCAT CATCGCGTAC
AAGATCGCCG CCCACGCGGC CGACGTCGCC AAGGGCCACC CCGGCGCCCG CGCCCGCGAC
GACGCGCTGA GCCAGGCCCG CTTCGACTTC CGCTGGCAGG ACCAGTTCAA CCTGGGCCTG
GACCCCGACA CCGCCCAGGC CTACCACGAC GAAACCCTGC CCAAGGACAG CGCCAAGGTG
GCGCACTTCT GCTCCATGTG CGGCCCCAAG TTCTGCTCCA TGAAGATCAC CCAGGAAGTG
CGCGAATTCG CCGCTGCCAA GGGCGTGGCC GAGCAGGAAG GCATTGCCGC CGGAATGCAG
GCCAAGGCCG AGGAATTCAA CCGTGCGGGC GGGGAGTTCT ATATCCCCAT CGTGGCGGCC
AGCAGCGATA CGACGGCGCG TTGA
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| Protein sequence | MNAPDSIFTP AAGEAPDAQR FSDLLAQSRK PFPASTKSYL QGSLHSGLNV PVRDIQLTNG
EQVSVYDTSG PYTDPAVAID VRSGLPGVRN AWIESRGDSE YYAGRLRQAL DDGGKRGEED
ERVARLRAEA ASLQRQPRRA KSGGNVTQMH YARKGIITPE MEYVALRENG RREWMAEYQQ
DAAREARLAG NGLGAAIPKI ITPEFVRDEV ARGRAIIPAN INHPEIEPMA IGRNFKVKIN
ANIGNSAVTS SIEEEVEKLV WAIRWGADNV MDLSTGKNIH TTRDWIIRNS PVPIGTVPIY
QALEKVGGIA EDLTWPIFRD TLIEQAEQGV DYFTIHAGVR LAYIHLTAQR RTGIVSRGGS
IMAKWCMAHH RESFLYEHFE DICDIMKQYD VSFSLGDGLR PGSASDANDE AQFAELKTLG
ELTQLAWKHD VQTMIEGPGH VPMHMIQANM TEQLKHCHEA PFYTLGPLTI DIAPGYDHIA
SAIGAAMIGW FGTAMLCYVT PKEHLGLPDR DDVKQGIIAY KIAAHAADVA KGHPGARARD
DALSQARFDF RWQDQFNLGL DPDTAQAYHD ETLPKDSAKV AHFCSMCGPK FCSMKITQEV
REFAAAKGVA EQEGIAAGMQ AKAEEFNRAG GEFYIPIVAA SSDTTAR
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